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Protein

Uncharacterized protein YfdR

Gene

yfdR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  • cobalt ion binding Source: EcoCyc
  • nucleotidase activity Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7230-MONOMER.
ECOL316407:JW2358-MONOMER.
MetaCyc:G7230-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfdR
Gene namesi
Name:yfdR
Ordered Locus Names:b2361, JW2358
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14140. yfdR.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001692111 – 178Uncharacterized protein YfdRAdd BLAST178

Proteomic databases

PaxDbiP76514.
PRIDEiP76514.

Interactioni

Protein-protein interaction databases

BioGridi4260549. 11 interactors.
IntActiP76514. 4 interactors.
STRINGi511145.b2361.

Structurei

3D structure databases

ProteinModelPortaliP76514.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108R7K. Bacteria.
COG1896. LUCA.
HOGENOMiHOG000006145.
InParanoidiP76514.
KOiK06952.
OMAiQHSVHVS.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR006674. HD_domain.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76514-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFIKTFSGK HFYYDKINKD DIVINDIAVS LSNICRFAGH LSHFYSVAQH
60 70 80 90 100
AVLCSQLVPQ EFAFEALMHD ATEAYCQDIP APLKRLLPDY KRMEEKIDAV
110 120 130 140 150
IREKYGLPPV MSTPVKYADL IMLATERRDL GLDDGSFWPV LEGIPATEMF
160 170
NVIPLAPGHA YGMFMERFND LSELRKCA
Length:178
Mass (Da):20,255
Last modified:June 1, 2001 - v2
Checksum:i3C453FD652F3A5C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75420.2.
AP009048 Genomic DNA. Translation: BAE76700.1.
PIRiF65009.
RefSeqiNP_416862.2. NC_000913.3.
WP_000008183.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75420; AAC75420; b2361.
BAE76700; BAE76700; BAE76700.
GeneIDi946834.
KEGGiecj:JW2358.
eco:b2361.
PATRICi32120099. VBIEscCol129921_2458.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75420.2.
AP009048 Genomic DNA. Translation: BAE76700.1.
PIRiF65009.
RefSeqiNP_416862.2. NC_000913.3.
WP_000008183.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76514.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260549. 11 interactors.
IntActiP76514. 4 interactors.
STRINGi511145.b2361.

Proteomic databases

PaxDbiP76514.
PRIDEiP76514.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75420; AAC75420; b2361.
BAE76700; BAE76700; BAE76700.
GeneIDi946834.
KEGGiecj:JW2358.
eco:b2361.
PATRICi32120099. VBIEscCol129921_2458.

Organism-specific databases

EchoBASEiEB3892.
EcoGeneiEG14140. yfdR.

Phylogenomic databases

eggNOGiENOG4108R7K. Bacteria.
COG1896. LUCA.
HOGENOMiHOG000006145.
InParanoidiP76514.
KOiK06952.
OMAiQHSVHVS.

Enzyme and pathway databases

BioCyciEcoCyc:G7230-MONOMER.
ECOL316407:JW2358-MONOMER.
MetaCyc:G7230-MONOMER.

Miscellaneous databases

PROiP76514.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR006674. HD_domain.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYFDR_ECOLI
AccessioniPrimary (citable) accession number: P76514
Secondary accession number(s): Q2MAK6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: June 1, 2001
Last modified: November 2, 2016
This is version 98 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.