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Protein

Uncharacterized protein YfdN

Gene

yfdN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7226-MONOMER.
ECOL316407:JW5385-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfdN
Gene namesi
Name:yfdN
Synonyms:yzyA
Ordered Locus Names:b2357, JW5385
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12949. yfdN.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001692061 – 164Uncharacterized protein YfdNAdd BLAST164

Proteomic databases

PaxDbiP76510.
PRIDEiP76510.

Interactioni

Protein-protein interaction databases

BioGridi4262076. 15 interactors.
STRINGi511145.b2357.

Structurei

3D structure databases

ProteinModelPortaliP76510.
SMRiP76510.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000123848.
OMAiCLRKSRK.

Family and domain databases

InterProiIPR020344. Phage_SfV_Orf40.
IPR024684. Tscrpt_act_PerC/SfV_Orf40.
[Graphical view]
PfamiPF06069. PerC. 1 hit.
[Graphical view]
ProDomiPD096295. Uncharacterised_YfdN. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P76510-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMSLLNDVQ KFIEAHPGCT SGDIADAFAG YSRQRVLQSA SKLRQSGRVA
60 70 80 90 100
HRCEGDTHRH FPRLTERAQD PEPQPVRETR PVRNFYVGTN DPRVILCLTR
110 120 130 140 150
QAEELESRGL YRRAATVWMA AFRESHSQPE RNNFLARRER CLRKSSKRAA
160
SGEEWYLSGN YVGA
Length:164
Mass (Da):18,766
Last modified:February 1, 1997 - v1
Checksum:iEC3C6404F98B484D
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti73P → L (PubMed:3532033).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75416.1.
AP009048 Genomic DNA. Translation: BAE76697.1.
X04387 Genomic DNA. No translation available.
PIRiB65009.
RefSeqiNP_416858.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC75416; AAC75416; b2357.
BAE76697; BAE76697; BAE76697.
GeneIDi946419.
KEGGiecj:JW5385.
eco:b2357.
PATRICi32120089. VBIEscCol129921_2453.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75416.1.
AP009048 Genomic DNA. Translation: BAE76697.1.
X04387 Genomic DNA. No translation available.
PIRiB65009.
RefSeqiNP_416858.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP76510.
SMRiP76510.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262076. 15 interactors.
STRINGi511145.b2357.

Proteomic databases

PaxDbiP76510.
PRIDEiP76510.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75416; AAC75416; b2357.
BAE76697; BAE76697; BAE76697.
GeneIDi946419.
KEGGiecj:JW5385.
eco:b2357.
PATRICi32120089. VBIEscCol129921_2453.

Organism-specific databases

EchoBASEiEB2783.
EcoGeneiEG12949. yfdN.

Phylogenomic databases

HOGENOMiHOG000123848.
OMAiCLRKSRK.

Enzyme and pathway databases

BioCyciEcoCyc:G7226-MONOMER.
ECOL316407:JW5385-MONOMER.

Miscellaneous databases

PROiP76510.

Family and domain databases

InterProiIPR020344. Phage_SfV_Orf40.
IPR024684. Tscrpt_act_PerC/SfV_Orf40.
[Graphical view]
PfamiPF06069. PerC. 1 hit.
[Graphical view]
ProDomiPD096295. Uncharacterised_YfdN. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiYFDN_ECOLI
AccessioniPrimary (citable) accession number: P76510
Secondary accession number(s): Q2MAK9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.