Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P76509

- YFDM_ECOLI

UniProt

P76509 - YFDM_ECOLI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Putative uncharacterized protein YfdM

Gene

yfdM

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 1 out of 5- Protein uncertaini

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. site-specific DNA-methyltransferase (adenine-specific) activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7225-MONOMER.
ECOL316407:JW2352-MONOMER.

Protein family/group databases

REBASEi20309. M.EcoW3110ORF2350P.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YfdM
Gene namesi
Name:yfdM
Ordered Locus Names:b2356, JW2352
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG12950. yfdM.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9191Putative uncharacterized protein YfdMPRO_0000169205Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP76509.

Interactioni

Protein-protein interaction databases

IntActiP76509. 1 interaction.
STRINGi316407.yfdM.

Structurei

3D structure databases

ProteinModelPortaliP76509.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OMAiMAINAVS.

Family and domain databases

InterProiIPR008593. Dam_MeTrfase.
[Graphical view]
PfamiPF05869. Dam. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01712. phage_N6A_met. 1 hit.
PROSITEiPS00092. N6_MTASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76509 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSNKYCQALV ELRNKPAHEL KEVGDQWRTP DNIFWGINTL FGPFVLDLFT
60 70 80 90
DGDNAKCAAY YTAEDNALAH DWSERLAELK GAAFGNPPYP W
Length:91
Mass (Da):10,336
Last modified:November 1, 1997 - v2
Checksum:i19890305A69C014B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76696.1.
X04387 Genomic DNA. No translation available.
PIRiA65009.
RefSeqiYP_490596.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiBAE76696; BAE76696; BAE76696.
GeneIDi12931550.
KEGGiecj:Y75_p2321.
PATRICi48664114. VBIEscCol107702_2397.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76696.1 .
X04387 Genomic DNA. No translation available.
PIRi A65009.
RefSeqi YP_490596.1. NC_007779.1.

3D structure databases

ProteinModelPortali P76509.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P76509. 1 interaction.
STRINGi 316407.yfdM.

Protein family/group databases

REBASEi 20309. M.EcoW3110ORF2350P.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAE76696 ; BAE76696 ; BAE76696 .
GeneIDi 12931550.
KEGGi ecj:Y75_p2321.
PATRICi 48664114. VBIEscCol107702_2397.

Organism-specific databases

EchoBASEi EB2784.
EcoGenei EG12950. yfdM.

Phylogenomic databases

OMAi MAINAVS.

Enzyme and pathway databases

BioCyci EcoCyc:G7225-MONOMER.
ECOL316407:JW2352-MONOMER.

Gene expression databases

Genevestigatori P76509.

Family and domain databases

InterProi IPR008593. Dam_MeTrfase.
[Graphical view ]
Pfami PF05869. Dam. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01712. phage_N6A_met. 1 hit.
PROSITEi PS00092. N6_MTASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. "Nucleotide sequence of the gene responsible for D-xylose uptake in Escherichia coli."
    Kurose N., Watanabe K., Kimura A.
    Nucleic Acids Res. 14:7115-7123(1986) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-25.

Entry informationi

Entry nameiYFDM_ECOLI
AccessioniPrimary (citable) accession number: P76509
Secondary accession number(s): Q2MAL0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: October 1, 2014
This is version 83 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

External Data

Dasty 3