P76509 (YFDM_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative uncharacterized protein YfdM

Gene names

Name:	yfdM
Ordered Locus Names:	b2356, JW2352

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	91 AA.
Sequence status	Complete.
Protein existence	Uncertain

General annotation (Comments)

Caution

Could be the product of a pseudogene.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro site-specific DNA-methyltransferase (adenine-specific) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 91	91	Putative uncharacterized protein YfdM		PRO_0000169205

Sequences

	Sequence		Length	Mass (Da)
	P76509 [UniParc]. Last modified November 1, 1997. Version 2. Checksum: 19890305A69C014B	FASTA	91	10,336
	10 20 30 40 50 60 MSNKYCQALV ELRNKPAHEL KEVGDQWRTP DNIFWGINTL FGPFVLDLFT DGDNAKCAAY 70 80 90 YTAEDNALAH DWSERLAELK GAAFGNPPYP W

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	"Nucleotide sequence of the gene responsible for D-xylose uptake in Escherichia coli." Kurose N., Watanabe K., Kimura A. Nucleic Acids Res. 14:7115-7123(1986) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-25.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00096 Genomic DNA. No translation available. AP009048 Genomic DNA. Translation: BAE76696.1. X04387 Genomic DNA. No translation available.
PIR	A65009.
RefSeq	YP_490596.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P76509.
ModBase	Search...
Protein-protein interaction databases
STRING	316407.yfdM.
Protein family/group databases
REBASE	20309. M.EcoW3110ORF2350P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAE76696; BAE76696; BAE76696.
GeneID	12931550.
KEGG	ecj:Y75_p2321.
PATRIC	48664114. VBIEscCol107702_2397.
Organism-specific databases
EchoBASE	EB2784.
EcoGene	EG12950. yfdM.
Enzyme and pathway databases
BioCyc	EcoCyc:G7225-MONOMER. ECOL316407:JW2352-MONOMER.
Gene expression databases
Genevestigator	P76509.
Family and domain databases
InterPro	IPR008593. Dam_MeTrfase. [Graphical view]
Pfam	PF05869. Dam. 1 hit. [Graphical view]
TIGRFAMs	TIGR01712. phage_N6A_met. 1 hit.
PROSITE	PS00092. N6_MTASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YFDM_ECOLI

Accession

Primary (citable) accession number: P76509
Secondary accession number(s): Q2MAL0

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 1, 2013
This is version 79 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program