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P76509 (YFDM_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative uncharacterized protein YfdM
Gene names
Name:yfdM
Ordered Locus Names:b2356, JW2352
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length91 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Caution

Could be the product of a pseudogene.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9191Putative uncharacterized protein YfdM
PRO_0000169205

Sequences

Sequence LengthMass (Da)Tools
P76509 [UniParc].

Last modified November 1, 1997. Version 2.
Checksum: 19890305A69C014B

FASTA9110,336
        10         20         30         40         50         60 
MSNKYCQALV ELRNKPAHEL KEVGDQWRTP DNIFWGINTL FGPFVLDLFT DGDNAKCAAY 

        70         80         90 
YTAEDNALAH DWSERLAELK GAAFGNPPYP W 

« Hide

References

« Hide 'large scale' references
[1]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]"Nucleotide sequence of the gene responsible for D-xylose uptake in Escherichia coli."
Kurose N., Watanabe K., Kimura A.
Nucleic Acids Res. 14:7115-7123(1986) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-25.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76696.1.
X04387 Genomic DNA. No translation available.
PIRA65009.
RefSeqYP_490596.1. NC_007779.1.

3D structure databases

ProteinModelPortalP76509.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP76509. 1 interaction.
STRING316407.yfdM.

Protein family/group databases

REBASE20309. M.EcoW3110ORF2350P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAE76696; BAE76696; BAE76696.
GeneID12931550.
KEGGecj:Y75_p2321.
PATRIC48664114. VBIEscCol107702_2397.

Organism-specific databases

EchoBASEEB2784.
EcoGeneEG12950. yfdM.

Enzyme and pathway databases

BioCycEcoCyc:G7225-MONOMER.
ECOL316407:JW2352-MONOMER.

Gene expression databases

GenevestigatorP76509.

Family and domain databases

InterProIPR008593. Dam_MeTrfase.
[Graphical view]
PfamPF05869. Dam. 1 hit.
[Graphical view]
TIGRFAMsTIGR01712. phage_N6A_met. 1 hit.
PROSITEPS00092. N6_MTASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYFDM_ECOLI
AccessionPrimary (citable) accession number: P76509
Secondary accession number(s): Q2MAL0
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: April 16, 2014
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene