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Protein

Uncharacterized protein YfdF

Gene

yfdF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7215-MONOMER.
ECOL316407:JW2342-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfdF
Gene namesi
Name:yfdF
Ordered Locus Names:b2345, JW2342
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14130. yfdF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 352352Uncharacterized protein YfdFPRO_0000169201Add
BLAST

Proteomic databases

PaxDbiP76505.

Interactioni

Protein-protein interaction databases

BioGridi4260537. 49 interactions.
IntActiP76505. 1 interaction.
STRINGi511145.b2345.

Structurei

3D structure databases

ProteinModelPortaliP76505.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000009518.
OMAiPDRFNIN.
OrthoDBiEOG6FFS30.

Sequencei

Sequence statusi: Complete.

P76505-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPSISINNT SAAYPESINE NNNDEVNGLV QEFKNLFNGK EGISTCIKHL
60 70 80 90 100
LELIKNAIRV NDDPYRFNIN NSSVTYIDID SNDTDHITIG IDNQEPIELP
110 120 130 140 150
ANYKDKELVR TIINDNIVEK THDINNKEMI FSALKEIYDG DPGFIFDKIS
160 170 180 190 200
HKLRHTVTEF DESGKSEPTD LFTWYGKDKK GDSLAIVIKN KNGNDYLSLG
210 220 230 240 250
YYDQDDYHIQ RGIRINGDSL TQYCSENARS ASAWFESSKA IMAESFATGS
260 270 280 290 300
DHQVVNELNG ERLREPNDVF KRYGRAIRYD FQVDDAKYKC DHLKEIVSTL
310 320 330 340 350
VGNKINVGHS QKIYKHFKDL EGKIEERLQN RQAEYQNEIN QPSAPGVNFD

DI
Length:352
Mass (Da):40,249
Last modified:February 1, 1997 - v1
Checksum:i632F3D318C139491
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75405.1.
AP009048 Genomic DNA. Translation: BAE76693.1.
PIRiG65007.
RefSeqiNP_416847.1. NC_000913.3.
WP_000937788.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75405; AAC75405; b2345.
BAE76693; BAE76693; BAE76693.
GeneIDi946819.
KEGGiecj:JW2342.
eco:b2345.
PATRICi32120063. VBIEscCol129921_2441.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75405.1.
AP009048 Genomic DNA. Translation: BAE76693.1.
PIRiG65007.
RefSeqiNP_416847.1. NC_000913.3.
WP_000937788.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76505.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260537. 49 interactions.
IntActiP76505. 1 interaction.
STRINGi511145.b2345.

Proteomic databases

PaxDbiP76505.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75405; AAC75405; b2345.
BAE76693; BAE76693; BAE76693.
GeneIDi946819.
KEGGiecj:JW2342.
eco:b2345.
PATRICi32120063. VBIEscCol129921_2441.

Organism-specific databases

EchoBASEiEB3882.
EcoGeneiEG14130. yfdF.

Phylogenomic databases

HOGENOMiHOG000009518.
OMAiPDRFNIN.
OrthoDBiEOG6FFS30.

Enzyme and pathway databases

BioCyciEcoCyc:G7215-MONOMER.
ECOL316407:JW2342-MONOMER.

Miscellaneous databases

PROiP76505.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYFDF_ECOLI
AccessioniPrimary (citable) accession number: P76505
Secondary accession number(s): Q2MAL3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: February 1, 1997
Last modified: April 13, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.