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Protein

Inner membrane transport protein RhmT

Gene

rhmT

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciEcoCyc:B2246-MONOMER.
ECOL316407:JW2240-MONOMER.

Protein family/group databases

TCDBi2.A.1.14.35. the major facilitator superfamily (mfs).

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane transport protein RhmT
Gene namesi
Name:rhmT
Synonyms:yfaV
Ordered Locus Names:b2246, JW2240
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14084. rhmT.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 1616CytoplasmicSequence analysisAdd
BLAST
Transmembranei17 – 3721HelicalSequence analysisAdd
BLAST
Topological domaini38 – 5417PeriplasmicSequence analysisAdd
BLAST
Transmembranei55 – 7521HelicalSequence analysisAdd
BLAST
Topological domaini76 – 816CytoplasmicSequence analysis
Transmembranei82 – 10221HelicalSequence analysisAdd
BLAST
Topological domaini103 – 14341PeriplasmicSequence analysisAdd
BLAST
Transmembranei144 – 16421HelicalSequence analysisAdd
BLAST
Topological domaini165 – 17410CytoplasmicSequence analysis
Transmembranei175 – 19521HelicalSequence analysisAdd
BLAST
Topological domaini196 – 24247PeriplasmicSequence analysisAdd
BLAST
Transmembranei243 – 26321HelicalSequence analysisAdd
BLAST
Topological domaini264 – 27411CytoplasmicSequence analysisAdd
BLAST
Transmembranei275 – 29521HelicalSequence analysisAdd
BLAST
Topological domaini296 – 32429PeriplasmicSequence analysisAdd
BLAST
Transmembranei325 – 34521HelicalSequence analysisAdd
BLAST
Topological domaini346 – 36116CytoplasmicSequence analysisAdd
BLAST
Transmembranei362 – 38221HelicalSequence analysisAdd
BLAST
Topological domaini383 – 39412PeriplasmicSequence analysisAdd
BLAST
Transmembranei395 – 41521HelicalSequence analysisAdd
BLAST
Topological domaini416 – 42914CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: GO_Central
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 429429Inner membrane transport protein RhmTPRO_0000121390Add
BLAST

Proteomic databases

PaxDbiP76470.

Interactioni

Protein-protein interaction databases

BioGridi4260489. 115 interactions.
STRINGi511145.b2246.

Structurei

3D structure databases

ProteinModelPortaliP76470.
SMRiP76470. Positions 187-212.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105CSP. Bacteria.
ENOG410XNQ6. LUCA.
HOGENOMiHOG000135240.
InParanoidiP76470.
OMAiIYFAFVM.
PhylomeDBiP76470.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76470-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTALLDAVV KKNRVRLIPF MLALYVLAFL DRSNIGFAKQ TYQIDTGLSN
60 70 80 90 100
EAYALGAGIF FVVYAFLGVP ANLLMRKLGA RTWIGTTTLL WGFLSAAMAW
110 120 130 140 150
ADTEAKFLIV RTLLRAAEAG FFPGMIYLTS QWFPQRNRAS IMGLFYMGAP
160 170 180 190 200
LALTLGSPLS GALLEMHGFM GHPGWFWMFV IEGLLAVGAG VFTFFWLDDT
210 220 230 240 250
PEQARFLSKQ EKTLLINQLA SEEQQKVTSR LSDALRNGRV WQLAIIYLTI
260 270 280 290 300
QVAVYGLIFF LPTQVAALLG TKVGFTASVV TAIPWVAALF GTWLIPRYSD
310 320 330 340 350
KTGERRNVAA LTLLAAGIGI GLSGLLSPVM AIVALCVAAI GFIAVQPVFW
360 370 380 390 400
TMPTQLLSGT ALAAGIGFVN LFGAVGGFIA PILRVKAETL FASDAAGLLT
410 420
LAAVAVIGSL IIFTLRVNRT VAQTDVAHH
Length:429
Mass (Da):46,294
Last modified:December 15, 1998 - v2
Checksum:i6C22A0A083BA99BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75306.2.
AP009048 Genomic DNA. Translation: BAA16070.1.
PIRiD64995.
RefSeqiNP_416749.4. NC_000913.3.
WP_000100890.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75306; AAC75306; b2246.
BAA16070; BAA16070; BAA16070.
GeneIDi945796.
KEGGiecj:JW2240.
eco:b2246.
PATRICi32119855. VBIEscCol129921_2337.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75306.2.
AP009048 Genomic DNA. Translation: BAA16070.1.
PIRiD64995.
RefSeqiNP_416749.4. NC_000913.3.
WP_000100890.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76470.
SMRiP76470. Positions 187-212.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260489. 115 interactions.
STRINGi511145.b2246.

Protein family/group databases

TCDBi2.A.1.14.35. the major facilitator superfamily (mfs).

Proteomic databases

PaxDbiP76470.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75306; AAC75306; b2246.
BAA16070; BAA16070; BAA16070.
GeneIDi945796.
KEGGiecj:JW2240.
eco:b2246.
PATRICi32119855. VBIEscCol129921_2337.

Organism-specific databases

EchoBASEiEB3837.
EcoGeneiEG14084. rhmT.

Phylogenomic databases

eggNOGiENOG4105CSP. Bacteria.
ENOG410XNQ6. LUCA.
HOGENOMiHOG000135240.
InParanoidiP76470.
OMAiIYFAFVM.
PhylomeDBiP76470.

Enzyme and pathway databases

BioCyciEcoCyc:B2246-MONOMER.
ECOL316407:JW2240-MONOMER.

Miscellaneous databases

PROiP76470.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRHMT_ECOLI
AccessioniPrimary (citable) accession number: P76470
Secondary accession number(s): P76930
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: December 15, 1998
Last modified: September 7, 2016
This is version 116 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

Part of the rhmRDTA operon involved in L-rhamnonate utilization.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.