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Protein

Inner membrane transport protein RhmT

Gene

rhmT

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Part of the rhmRDTA operon involved in L-rhamnonate utilization.

GO - Biological processi

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:B2246-MONOMER

Protein family/group databases

TCDBi2.A.1.14.35 the major facilitator superfamily (mfs)

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane transport protein RhmT
Gene namesi
Name:rhmT
Synonyms:yfaV
Ordered Locus Names:b2246, JW2240
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14084 rhmT

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 16CytoplasmicSequence analysisAdd BLAST16
Transmembranei17 – 37HelicalSequence analysisAdd BLAST21
Topological domaini38 – 54PeriplasmicSequence analysisAdd BLAST17
Transmembranei55 – 75HelicalSequence analysisAdd BLAST21
Topological domaini76 – 81CytoplasmicSequence analysis6
Transmembranei82 – 102HelicalSequence analysisAdd BLAST21
Topological domaini103 – 143PeriplasmicSequence analysisAdd BLAST41
Transmembranei144 – 164HelicalSequence analysisAdd BLAST21
Topological domaini165 – 174CytoplasmicSequence analysis10
Transmembranei175 – 195HelicalSequence analysisAdd BLAST21
Topological domaini196 – 242PeriplasmicSequence analysisAdd BLAST47
Transmembranei243 – 263HelicalSequence analysisAdd BLAST21
Topological domaini264 – 274CytoplasmicSequence analysisAdd BLAST11
Transmembranei275 – 295HelicalSequence analysisAdd BLAST21
Topological domaini296 – 324PeriplasmicSequence analysisAdd BLAST29
Transmembranei325 – 345HelicalSequence analysisAdd BLAST21
Topological domaini346 – 361CytoplasmicSequence analysisAdd BLAST16
Transmembranei362 – 382HelicalSequence analysisAdd BLAST21
Topological domaini383 – 394PeriplasmicSequence analysisAdd BLAST12
Transmembranei395 – 415HelicalSequence analysisAdd BLAST21
Topological domaini416 – 429CytoplasmicSequence analysisAdd BLAST14

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001213901 – 429Inner membrane transport protein RhmTAdd BLAST429

Proteomic databases

PaxDbiP76470
PRIDEiP76470

Interactioni

Protein-protein interaction databases

BioGridi4260489, 115 interactors
STRINGi316385.ECDH10B_2406

Structurei

3D structure databases

ProteinModelPortaliP76470
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105CSP Bacteria
ENOG410XNQ6 LUCA
HOGENOMiHOG000135240
InParanoidiP76470
OMAiMCRIMVT
PhylomeDBiP76470

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR036259 MFS_trans_sf
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit

Sequencei

Sequence statusi: Complete.

P76470-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTALLDAVV KKNRVRLIPF MLALYVLAFL DRSNIGFAKQ TYQIDTGLSN
60 70 80 90 100
EAYALGAGIF FVVYAFLGVP ANLLMRKLGA RTWIGTTTLL WGFLSAAMAW
110 120 130 140 150
ADTEAKFLIV RTLLRAAEAG FFPGMIYLTS QWFPQRNRAS IMGLFYMGAP
160 170 180 190 200
LALTLGSPLS GALLEMHGFM GHPGWFWMFV IEGLLAVGAG VFTFFWLDDT
210 220 230 240 250
PEQARFLSKQ EKTLLINQLA SEEQQKVTSR LSDALRNGRV WQLAIIYLTI
260 270 280 290 300
QVAVYGLIFF LPTQVAALLG TKVGFTASVV TAIPWVAALF GTWLIPRYSD
310 320 330 340 350
KTGERRNVAA LTLLAAGIGI GLSGLLSPVM AIVALCVAAI GFIAVQPVFW
360 370 380 390 400
TMPTQLLSGT ALAAGIGFVN LFGAVGGFIA PILRVKAETL FASDAAGLLT
410 420
LAAVAVIGSL IIFTLRVNRT VAQTDVAHH
Length:429
Mass (Da):46,294
Last modified:December 15, 1998 - v2
Checksum:i6C22A0A083BA99BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC75306.2
AP009048 Genomic DNA Translation: BAA16070.1
PIRiD64995
RefSeqiNP_416749.4, NC_000913.3
WP_000100890.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75306; AAC75306; b2246
BAA16070; BAA16070; BAA16070
GeneIDi945796
KEGGiecj:JW2240
eco:b2246
PATRICifig|511145.12.peg.2337

Similar proteinsi

Entry informationi

Entry nameiRHMT_ECOLI
AccessioniPrimary (citable) accession number: P76470
Secondary accession number(s): P76930
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: December 15, 1998
Last modified: March 28, 2018
This is version 124 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health