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Protein

Putative UPF0192 protein YfaS

Gene

yfaS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7154-MONOMER.
EcoCyc:G7155-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative UPF0192 protein YfaS
Gene namesi
Name:yfaS
Synonyms:yfaR
Ordered Locus Names:b4500, JW2221/JW2222
ORF Names:b2227/b2228
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14081. yfaS.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3838Sequence analysisAdd
BLAST
Chaini39 – 15341496Putative UPF0192 protein YfaSPRO_0000036239Add
BLAST

Proteomic databases

PRIDEiP76464.

Interactioni

Protein-protein interaction databases

DIPiDIP-11951N.
IntActiP76464. 25 interactions.

Structurei

3D structure databases

ProteinModelPortaliP76464.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0192 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

HOGENOMiHOG000122345.
InParanoidiP76464.
PhylomeDBiP76464.

Family and domain databases

InterProiIPR002890. A2M_N.
IPR011625. A2M_N_2.
IPR001599. Macroglobln_a2.
IPR008930. Terpenoid_cyclase/PrenylTrfase.
[Graphical view]
PfamiPF00207. A2M. 1 hit.
PF01835. A2M_N. 1 hit.
PF07703. A2M_N_2. 1 hit.
[Graphical view]
SMARTiSM01360. A2M. 1 hit.
SM01359. A2M_N_2. 1 hit.
[Graphical view]
SUPFAMiSSF48239. SSF48239. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P76464-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTQRFQSQF HWHLSFKFSG AIAACLSLSL VGTGLANADD SLPSSNYAPP
60 70 80 90 100
AGGTFFLLAD SSFSSSEEAK VRLEAPGRDY RRYQMEEYGG VDVRLYRIPD
110 120 130 140 150
PMAFLRQQKN LHRIVVQPQY LGDGLNNTLT WLWDNWYGKS RRVMQRTFSS
160 170 180 190 200
QSRQNVTQAL PELQLGNAII KPSRYVQNNQ FSPLKKYPLV KQFRYPLWQA
210 220 230 240 250
KPFEPQQGVK LEGASSNFIS PQPGNIYIPL GQQEPGLYLV EAMVGGYRAT
260 270 280 290 300
TVVFVSDTVA LSKVSGKELL VWTAGKKQGE AKPGSEILWT DGLGVMTRGV
310 320 330 340 350
TDDSGTLQLQ HISPERSYIL GKDAEGGVFV SENFFYESEI YNTRLYIFTD
360 370 380 390 400
RPLYRAGDRV DVKVIGREFH DPLHSSPIVS APAKLSVLDA NGSLLQTVNV
410 420 430 440 450
TLDARNGGQG SFRLPENAVA GGYELRLAYR NQVYSSSFRV ANYIKPHFEI
460 470 480 490 500
GLALAKKEFK TGEAVSGKLQ LLYPDGEPVK NARVQLSLRA QQLSMVGNDL
510 520 530 540 550
RYAGRFPVSL EGSETVSDAS GHVALNLPAA DKPSRYLLTV SASDGAAYRV
560 570 580 590 600
TTTKEILIER GLAHYSLSTA AQYSNSGESV VFRYAALESS KQVPVTYEWL
610 620 630 640 650
RLEDRTSHSG ELPSGGKSFT VNFAKPGNYN LTLRDKDGLI LAGLSHAVSG
660 670 680 690 700
KGSTAHTGTV DIVADKTLYQ PGETAKMLIT FPEPIDEALL TLERDRVEQQ
710 720 730 740 750
SLLSHPANWL TLQRLNDTQY EARVPVSNSF APNITFSVLY TRNGQYSFQN
760 770 780 790 800
AGIKVAVPQL DIRVKTDKTH YQPGELVNVE LTSSLKGKPV SAQLTVGVVD
810 820 830 840 850
EMIYALQPEI APNIGKFFYP LGRNNVRTSS SLSFISYDQA LSSEPVAPGA
860 870 880 890 900
TNRSERRVKM LERPRREEVD TAAWMPSLTT DKQGKAYFTF LMPDSLTRWR
910 920 930 940 950
ITARGMNGDG LVGQGRAYLR SEKNLYMKWS MPTVYRVGDK PAAGLFIFSQ
960 970 980 990 1000
QDNEPVALVT KFAGAEMRQT LTLHKGANYI SLTQNIQQSG LLSAELQQNG
1010 1020 1030 1040 1050
QVQDSISTKL SFVDNSWPVE QQKNVMLGGG DNALMLPEQA SNIRLQSSET
1060 1070 1080 1090 1100
PQEIFRNNLD ALVDEPWGGV INTGSRLIPL SLAWRSLADH QSAAANDIRQ
1110 1120 1130 1140 1150
MIQDNRLRLM QLAGPGARFT WWGEDGNGDA FLTAWAWYAD WQASQAIGVT
1160 1170 1180 1190 1200
QQPEYWQHML DSYAEQADNM PLLHRALVLA WAQEMNLPCK TLLKGLDEAI
1210 1220 1230 1240 1250
ARRGTKTEDF SEEDTRDIND SLILDTPESP LADAVANVLT MTLLKKAQLK
1260 1270 1280 1290 1300
STVMPQVQQY AWDKAANSNQ PLAHTVVLLN SGGDATQTAA ILSGLTAEQS
1310 1320 1330 1340 1350
TIERALAMNW LAKYMATMPP VVLPAPAGAW AKHKLTGGGE DWRWVGQGVP
1360 1370 1380 1390 1400
DILSFGDELS PQNVQVRWRE PAKMAQQSNI PVTVERQLYR LIPGEEEMSF
1410 1420 1430 1440 1450
ILQPVTSNEI DSDALYLDEI TLTSEQDAVL RYGQVEVPLP PGADVERTTW
1460 1470 1480 1490 1500
GISVNKPNAA KQQGQLLEKA RNEMGELAYM VPVKELTGTV TFRHLLRFSQ
1510 1520 1530
KGQFVLPPAR YVRSYAPAQQ SVAAGSEWTG MQVK
Length:1,534
Mass (Da):169,845
Last modified:May 2, 2002 - v2
Checksum:i73B71431C51F8BC6
GO

Sequence cautioni

The sequence AP009048 differs from that shown. Reason: Erroneous termination at position 1368. Translated as Trp.Curated
The sequence U00096 differs from that shown. Reason: Erroneous termination at position 1368. Translated as Trp.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliP76464.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-11951N.
IntActiP76464. 25 interactions.

Proteomic databases

PRIDEiP76464.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB3834.
EcoGeneiEG14081. yfaS.

Phylogenomic databases

HOGENOMiHOG000122345.
InParanoidiP76464.
PhylomeDBiP76464.

Enzyme and pathway databases

BioCyciEcoCyc:G7154-MONOMER.
EcoCyc:G7155-MONOMER.

Family and domain databases

InterProiIPR002890. A2M_N.
IPR011625. A2M_N_2.
IPR001599. Macroglobln_a2.
IPR008930. Terpenoid_cyclase/PrenylTrfase.
[Graphical view]
PfamiPF00207. A2M. 1 hit.
PF01835. A2M_N. 1 hit.
PF07703. A2M_N_2. 1 hit.
[Graphical view]
SMARTiSM01360. A2M. 1 hit.
SM01359. A2M_N_2. 1 hit.
[Graphical view]
SUPFAMiSSF48239. SSF48239. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
    Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T.
    , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
    DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYFAS_ECOLI
AccessioniPrimary (citable) accession number: P76464
Secondary accession number(s): P76465
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 2, 2002
Last modified: May 11, 2016
This is version 103 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.