Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Inner membrane protein YeeR

Gene

yeeR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7081-MONOMER.
ECOL316407:JW1983-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YeeR
Gene namesi
Name:yeeR
Ordered Locus Names:b2001, JW1983
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13385. yeeR.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 11CytoplasmicSequence analysis
Transmembranei2 – 2221HelicalSequence analysisAdd
BLAST
Topological domaini23 – 308PeriplasmicSequence analysis
Transmembranei31 – 5121HelicalSequence analysisAdd
BLAST
Topological domaini52 – 6110CytoplasmicSequence analysis
Transmembranei62 – 8221HelicalSequence analysisAdd
BLAST
Topological domaini83 – 9412PeriplasmicSequence analysisAdd
BLAST
Transmembranei95 – 11521HelicalSequence analysisAdd
BLAST
Topological domaini116 – 13621CytoplasmicSequence analysisAdd
BLAST
Transmembranei137 – 15721HelicalSequence analysisAdd
BLAST
Topological domaini158 – 1647PeriplasmicSequence analysis
Transmembranei165 – 18521HelicalSequence analysisAdd
BLAST
Topological domaini186 – 510325CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 510510Inner membrane protein YeeRPRO_0000169111Add
BLAST

Proteomic databases

PaxDbiP76361.
PRIDEiP76361.

Interactioni

Protein-protein interaction databases

BioGridi4260666. 94 interactions.
DIPiDIP-11864N.
IntActiP76361. 1 interaction.
STRINGi511145.b2001.

Structurei

3D structure databases

ProteinModelPortaliP76361.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108PZQ. Bacteria.
ENOG410XXEN. LUCA.
OrthoDBiEOG6Q8HZ2.

Sequencei

Sequence statusi: Complete.

P76361-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQIVGALIL LIAGFAILRL LFRALISTAS ALAGLILLCL FGPALLAGYI
60 70 80 90 100
TERITRLFHI RWLAGVFLTI AGMIISFMWG LDGKHIALEA HTFDSVKFIL
110 120 130 140 150
TTALAGGLLA VPLQIKNIQQ NGITPEDISK EINGYYCCFY TAFFLMACSA
160 170 180 190 200
CAPLIALQYD ISPSLMWWGG LLYWLAALVT LLWAASQIQA LKKLTCAISQ
210 220 230 240 250
TLEEQPVLNS KSWLTSLQND YSLPDSLTER IWLTLISQRI SRGELREFEL
260 270 280 290 300
ADGNWLLNNA WYERNMAGFN EQLKENLSFT PDELKTLFRN RLNLSPEAND
310 320 330 340 350
DFLDRCLDGG DWYPFSEGRR FVSFHHVDEL RICASCGLTE VHHAPENHKP
360 370 380 390 400
DPEWYCSSLC RETETLCQEI YERPYNSFIS DATANGLILM KLPETWSTNE
410 420 430 440 450
KMFASGGQGH GFAAERGNHI VDRVRLKNAR ILGDNNARNG ADRLVSGTEI
460 470 480 490 500
QTKYCSTAAR SVGAAFDGQN GQYRYMGNNG PMQLEVPRDQ YAGAVETMRN
510
KIREGKVEER
Length:510
Mass (Da):57,237
Last modified:May 30, 2000 - v2
Checksum:i511D65D73C879349
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75062.2.
AP009048 Genomic DNA. Translation: BAE76563.1.
PIRiH64964.
RefSeqiNP_416505.2. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC75062; AAC75062; b2001.
BAE76563; BAE76563; BAE76563.
GeneIDi946512.
KEGGiecj:JW1983.
eco:b2001.
PATRICi32119335. VBIEscCol129921_2077.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75062.2.
AP009048 Genomic DNA. Translation: BAE76563.1.
PIRiH64964.
RefSeqiNP_416505.2. NC_000913.3.

3D structure databases

ProteinModelPortaliP76361.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260666. 94 interactions.
DIPiDIP-11864N.
IntActiP76361. 1 interaction.
STRINGi511145.b2001.

Proteomic databases

PaxDbiP76361.
PRIDEiP76361.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75062; AAC75062; b2001.
BAE76563; BAE76563; BAE76563.
GeneIDi946512.
KEGGiecj:JW1983.
eco:b2001.
PATRICi32119335. VBIEscCol129921_2077.

Organism-specific databases

EchoBASEiEB3166.
EcoGeneiEG13385. yeeR.

Phylogenomic databases

eggNOGiENOG4108PZQ. Bacteria.
ENOG410XXEN. LUCA.
OrthoDBiEOG6Q8HZ2.

Enzyme and pathway databases

BioCyciEcoCyc:G7081-MONOMER.
ECOL316407:JW1983-MONOMER.

Miscellaneous databases

PROiP76361.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. "Global topology analysis of the Escherichia coli inner membrane proteome."
    Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.
    Science 308:1321-1323(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: K12 / MG1655 / ATCC 47076.

Entry informationi

Entry nameiYEER_ECOLI
AccessioniPrimary (citable) accession number: P76361
Secondary accession number(s): Q2MAZ3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 30, 2000
Last modified: April 13, 2016
This is version 94 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.