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Protein

Inner membrane protein YnjI

Gene

ynjI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6956-MONOMER.
ECOL316407:JW5288-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YnjI
Gene namesi
Name:ynjI
Ordered Locus Names:b1762, JW5288
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14011. ynjI.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 3838PeriplasmicSequence analysisAdd
BLAST
Transmembranei39 – 5921HelicalSequence analysisAdd
BLAST
Topological domaini60 – 689CytoplasmicSequence analysis
Transmembranei69 – 8921HelicalSequence analysisAdd
BLAST
Topological domaini90 – 234145PeriplasmicSequence analysisAdd
BLAST
Transmembranei235 – 25521HelicalSequence analysisAdd
BLAST
Topological domaini256 – 34691CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 346346Inner membrane protein YnjIPRO_0000169009Add
BLAST

Proteomic databases

PaxDbiP76228.
PRIDEiP76228.

Interactioni

Protein-protein interaction databases

BioGridi4259136. 10 interactions.
STRINGi511145.b1762.

Structurei

3D structure databases

ProteinModelPortaliP76228.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG41065FB. Bacteria.
ENOG4112A1H. LUCA.
HOGENOMiHOG000009481.
OMAiSWMTSIS.

Family and domain databases

InterProiIPR009677. DUF1266.
[Graphical view]
PfamiPF06889. DUF1266. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76228-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKVLLQNHP GSEKYSFNGW EIFNSNFERM IKENKAMLLC KWGFYLTCVV
60 70 80 90 100
AVMFVFAAIT SNGLNERGLI TAGCSFLYLL IMMGLIVRAG FKAKKEQLHY
110 120 130 140 150
YQAKGIEPLS IEKLQALQLI APYRFYHKQW SETLEFWPRK PEPGKDTFQY
160 170 180 190 200
HVLPFDSIDI ISKRRESLED QWGIEDSESY CALMEHFLSG DHGANTFKAN
210 220 230 240 250
MEEAPEQVIA LLNKFAVFPS DYISDCANHS SGKSSAKLIW AAELSWMISI
260 270 280 290 300
SSTAFQNGTI EEELAWHYIM LASRKAHELF ESEEDYQKNS QMGFLYWHIC
310 320 330 340
CYRRKLTDAE LEACYRYDKQ FWEHYSKKCR WPIRNVPWGA SSVKYS
Length:346
Mass (Da):40,346
Last modified:December 1, 2000 - v2
Checksum:i0AD0CBA64F58B44F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti36 – 361A → G in AAA83924 (PubMed:2553698).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74832.2.
AP009048 Genomic DNA. Translation: BAE76524.1.
J05076 Genomic DNA. Translation: AAA83924.1.
PIRiB64936.
RefSeqiNP_416276.4. NC_000913.3.
WP_000756910.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74832; AAC74832; b1762.
BAE76524; BAE76524; BAE76524.
GeneIDi946239.
KEGGiecj:JW5288.
eco:b1762.
PATRICi32118835. VBIEscCol129921_1835.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74832.2.
AP009048 Genomic DNA. Translation: BAE76524.1.
J05076 Genomic DNA. Translation: AAA83924.1.
PIRiB64936.
RefSeqiNP_416276.4. NC_000913.3.
WP_000756910.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76228.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259136. 10 interactions.
STRINGi511145.b1762.

Proteomic databases

PaxDbiP76228.
PRIDEiP76228.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74832; AAC74832; b1762.
BAE76524; BAE76524; BAE76524.
GeneIDi946239.
KEGGiecj:JW5288.
eco:b1762.
PATRICi32118835. VBIEscCol129921_1835.

Organism-specific databases

EchoBASEiEB3767.
EcoGeneiEG14011. ynjI.

Phylogenomic databases

eggNOGiENOG41065FB. Bacteria.
ENOG4112A1H. LUCA.
HOGENOMiHOG000009481.
OMAiSWMTSIS.

Enzyme and pathway databases

BioCyciEcoCyc:G6956-MONOMER.
ECOL316407:JW5288-MONOMER.

Miscellaneous databases

PROiP76228.

Family and domain databases

InterProiIPR009677. DUF1266.
[Graphical view]
PfamiPF06889. DUF1266. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYNJI_ECOLI
AccessioniPrimary (citable) accession number: P76228
Secondary accession number(s): Q2MB32, Q47665
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: September 7, 2016
This is version 101 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.