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Protein

TVP38/TMEM64 family inner membrane protein YdjZ

Gene

ydjZ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6947-MONOMER

Protein family/group databases

TCDBi9.B.27.1.2 the deda or ydjx-z (deda) family

Names & Taxonomyi

Protein namesi
Recommended name:
TVP38/TMEM64 family inner membrane protein YdjZ
Gene namesi
Name:ydjZ
Ordered Locus Names:b1752, JW1741
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14002 ydjZ

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 13PeriplasmicSequence analysisAdd BLAST13
Transmembranei14 – 34HelicalSequence analysisAdd BLAST21
Topological domaini35 – 64CytoplasmicSequence analysisAdd BLAST30
Transmembranei65 – 85HelicalSequence analysisAdd BLAST21
Topological domaini86 – 95PeriplasmicSequence analysis10
Transmembranei96 – 116HelicalSequence analysisAdd BLAST21
Topological domaini117 – 176CytoplasmicSequence analysisAdd BLAST60
Transmembranei177 – 197HelicalSequence analysisAdd BLAST21
Topological domaini198 – 202PeriplasmicSequence analysis5
Transmembranei203 – 223HelicalSequence analysisAdd BLAST21
Topological domaini224 – 235CytoplasmicSequence analysisAdd BLAST12

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001986341 – 235TVP38/TMEM64 family inner membrane protein YdjZAdd BLAST235

Proteomic databases

PaxDbiP76221
PRIDEiP76221

Interactioni

Protein-protein interaction databases

BioGridi4259418, 9 interactors
STRINGi316385.ECDH10B_1890

Structurei

3D structure databases

ProteinModelPortaliP76221
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TVP38/TMEM64 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108N5C Bacteria
COG0398 LUCA
HOGENOMiHOG000066621
InParanoidiP76221
OMAiRYIRSCG
PhylomeDBiP76221

Family and domain databases

InterProiView protein in InterPro
IPR032816 SNARE_assoc
IPR015414 TMEM64
PANTHERiPTHR12677 PTHR12677, 1 hit
PfamiView protein in Pfam
PF09335 SNARE_assoc, 1 hit

Sequencei

Sequence statusi: Complete.

P76221-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMMMQSRKIW YYRITLIILL FAMLLAWALL PGVHEFINRS VAAFAAVDQQ
60 70 80 90 100
GIERFIQSYG ALAAVVSFLL MILQAIAAPL PAFLITFANA SLFGAFWGGL
110 120 130 140 150
LSWTSSMAGA ALCFFIARVM GREVVEKLTG KTVLDSMDGF FTRYGKHTIL
160 170 180 190 200
VCRLLPFVPF DPISYAAGLT SIRFRSFFIA TGLGQLPATI VYSWAGSMLT
210 220 230
GGTFWFVTGL FILFALTVVI FMAKKIWLER QKRNA
Length:235
Mass (Da):26,160
Last modified:February 1, 1997 - v1
Checksum:i8B025135FDC66DDD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74822.1
AP009048 Genomic DNA Translation: BAE76519.1
PIRiH64934
RefSeqiNP_416266.1, NC_000913.3
WP_000980098.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74822; AAC74822; b1752
BAE76519; BAE76519; BAE76519
GeneIDi946269
KEGGiecj:JW1741
eco:b1752
PATRICifig|1411691.4.peg.503

Similar proteinsi

Entry informationi

Entry nameiYDJZ_ECOLI
AccessioniPrimary (citable) accession number: P76221
Secondary accession number(s): Q2MB37
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health