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Protein

Uncharacterized protein YdjY

Gene

ydjY

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6946-MONOMER.
ECOL316407:JW5283-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdjY
Gene namesi
Name:ydjY
Ordered Locus Names:b1751, JW5283
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14001. ydjY.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_000001385923 – 225Uncharacterized protein YdjYAdd BLAST203

Proteomic databases

PaxDbiP76220.
PRIDEiP76220.

Interactioni

Protein-protein interaction databases

BioGridi4260319. 21 interactors.
STRINGi511145.b1751.

Structurei

3D structure databases

ProteinModelPortaliP76220.
SMRiP76220.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini161 – 1904Fe-4S ferredoxin-typePROSITE-ProRule annotationAdd BLAST30

Sequence similaritiesi

Contains 1 4Fe-4S ferredoxin-type domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108KCW. Bacteria.
ENOG41100DI. LUCA.
HOGENOMiHOG000121098.
OMAiRTMSQHY.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
[Graphical view]
PROSITEiPS51379. 4FE4S_FER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P76220-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQHYSVSWK KGLAALCLLA VAGLSGCDQQ ENAAAKVEYD GLSNSQPLRV
60 70 80 90 100
DANNHTVTML VQINGRFLTD DTRHGIVFKD GSNGHKSLFM GYATPKAFYE
110 120 130 140 150
ALKEAGGTPG ENMTMDNKET THVTGSKLDI SVNWQGAAKA YSFDEVIVDS
160 170 180 190 200
NGKKLDMRFG GNLTAAEEKK TGCLVCLDSC PVGIVSNATY TYGAVEKRGE
210 220
VKFKGNASVL PADNTLATVT FKIAE
Length:225
Mass (Da):24,125
Last modified:April 27, 2001 - v2
Checksum:i35238165A856E1B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74821.2.
AP009048 Genomic DNA. Translation: BAE76518.1.
PIRiG64934.
RefSeqiNP_416265.4. NC_000913.3.
WP_000939212.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74821; AAC74821; b1751.
BAE76518; BAE76518; BAE76518.
GeneIDi946248.
KEGGiecj:JW5283.
eco:b1751.
PATRICi32118813. VBIEscCol129921_1824.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74821.2.
AP009048 Genomic DNA. Translation: BAE76518.1.
PIRiG64934.
RefSeqiNP_416265.4. NC_000913.3.
WP_000939212.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76220.
SMRiP76220.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260319. 21 interactors.
STRINGi511145.b1751.

Proteomic databases

PaxDbiP76220.
PRIDEiP76220.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74821; AAC74821; b1751.
BAE76518; BAE76518; BAE76518.
GeneIDi946248.
KEGGiecj:JW5283.
eco:b1751.
PATRICi32118813. VBIEscCol129921_1824.

Organism-specific databases

EchoBASEiEB3757.
EcoGeneiEG14001. ydjY.

Phylogenomic databases

eggNOGiENOG4108KCW. Bacteria.
ENOG41100DI. LUCA.
HOGENOMiHOG000121098.
OMAiRTMSQHY.

Enzyme and pathway databases

BioCyciEcoCyc:G6946-MONOMER.
ECOL316407:JW5283-MONOMER.

Miscellaneous databases

PROiP76220.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
[Graphical view]
PROSITEiPS51379. 4FE4S_FER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYDJY_ECOLI
AccessioniPrimary (citable) accession number: P76220
Secondary accession number(s): Q2MB38
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: April 27, 2001
Last modified: November 2, 2016
This is version 88 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.