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Protein

Uncharacterized protein YdjO

Gene

ydjO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6935-MONOMER.
ECOL316407:JW1719-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdjO
Gene namesi
Name:ydjO
Ordered Locus Names:b1730, JW1719
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG13991. ydjO.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 267267Uncharacterized protein YdjOPRO_0000169005Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP76210.

Interactioni

Protein-protein interaction databases

IntActiP76210. 1 interaction.
STRINGi511145.b1730.

Structurei

3D structure databases

ProteinModelPortaliP76210.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000009731.
OrthoDBiEOG66MQMR.

Sequencei

Sequence statusi: Complete.

P76210-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFSTNLIQSN YGDLNIKSLA FDSFKERLQS TMTALTFFIS TGQCDCDEIA
60 70 80 90 100
ESNFNYMIAY MSNINYDASK PGAPALSFDT YLQDNVKYRV IINNLYGSEI
110 120 130 140 150
RIRGINKDFI GMDVTSVFRP EKMTNLISIK NRLVIHYLRT IYYEQNYIHP
160 170 180 190 200
VGSIFAAIQK NESLLKFPSI ISMLNINLLF NPLNLPGMGS GVLEDIMSIP
210 220 230 240 250
DSSLRKRLGY EVLSFSLQAH SLSQECIDKL DIFFADDLFK YESVCIAAME
260
HLKSKATAPI QNGPLPA
Length:267
Mass (Da):30,160
Last modified:November 24, 2009 - v2
Checksum:i078E9F86999376F0
GO

Sequence cautioni

The sequence BAE76512.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74800.2.
AP009048 Genomic DNA. Translation: BAE76512.1. Different initiation.
PIRiB64932.
RefSeqiNP_416244.2. NC_000913.3.
YP_489991.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC74800; AAC74800; b1730.
BAE76512; BAE76512; BAE76512.
GeneIDi12930141.
946237.
KEGGiecj:Y75_p1705.
eco:b1730.
PATRICi32118767. VBIEscCol129921_1801.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74800.2.
AP009048 Genomic DNA. Translation: BAE76512.1. Different initiation.
PIRiB64932.
RefSeqiNP_416244.2. NC_000913.3.
YP_489991.1. NC_007779.1.

3D structure databases

ProteinModelPortaliP76210.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP76210. 1 interaction.
STRINGi511145.b1730.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74800; AAC74800; b1730.
BAE76512; BAE76512; BAE76512.
GeneIDi12930141.
946237.
KEGGiecj:Y75_p1705.
eco:b1730.
PATRICi32118767. VBIEscCol129921_1801.

Organism-specific databases

EchoBASEiEB3747.
EcoGeneiEG13991. ydjO.

Phylogenomic databases

HOGENOMiHOG000009731.
OrthoDBiEOG66MQMR.

Enzyme and pathway databases

BioCyciEcoCyc:G6935-MONOMER.
ECOL316407:JW1719-MONOMER.

Gene expression databases

GenevestigatoriP76210.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYDJO_ECOLI
AccessioniPrimary (citable) accession number: P76210
Secondary accession number(s): Q2MB44
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: November 24, 2009
Last modified: January 7, 2015
This is version 77 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.