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Protein

Uncharacterized protein YniB

Gene

yniB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6931-MONOMER.
ECOL316407:JW1715-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YniB
Gene namesi
Name:yniB
Ordered Locus Names:b1726, JW1715
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13987. yniB.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei15 – 3521HelicalSequence analysisAdd
BLAST
Transmembranei80 – 10021HelicalSequence analysisAdd
BLAST
Transmembranei158 – 17821HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 178178Uncharacterized protein YniBPRO_0000169000Add
BLAST

Proteomic databases

PaxDbiP76208.
PRIDEiP76208.

Interactioni

Protein-protein interaction databases

BioGridi4263400. 7 interactions.
DIPiDIP-12776N.
IntActiP76208. 1 interaction.
STRINGi511145.b1726.

Structurei

3D structure databases

ProteinModelPortaliP76208.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To Y.pestis YfeE.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4107PN8. Bacteria.
ENOG410YJ19. LUCA.
HOGENOMiHOG000121041.
OMAiMVRFNTP.
OrthoDBiEOG6ZPT00.

Family and domain databases

InterProiIPR025229. YniB-like.
[Graphical view]
PfamiPF14002. YniB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76208-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYQQAGRIA VLKRILGWVI FIPALISTLI SLLKFMNTRQ ENKEGINAVM
60 70 80 90 100
LDFTHVMIDM MQANTPFLNL FWYNSPTPNF NGGVNVMFWV IFILIFVGLA
110 120 130 140 150
LQDSGARMSR QARFLREGVE DQLILEKAKG EEGLTREQIE SRIVVPHHTI
160 170
FLQFFSLYIL PVICIAAGYV FFSLLGFI
Length:178
Mass (Da):20,367
Last modified:February 1, 1997 - v1
Checksum:i2BAB6884D37E9E36
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74796.1.
AP009048 Genomic DNA. Translation: BAE76510.1.
PIRiF64931.
RefSeqiNP_416240.1. NC_000913.3.
WP_000222163.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74796; AAC74796; b1726.
BAE76510; BAE76510; BAE76510.
GeneIDi945140.
KEGGiecj:JW1715.
eco:b1726.
PATRICi32118759. VBIEscCol129921_1797.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74796.1.
AP009048 Genomic DNA. Translation: BAE76510.1.
PIRiF64931.
RefSeqiNP_416240.1. NC_000913.3.
WP_000222163.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76208.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263400. 7 interactions.
DIPiDIP-12776N.
IntActiP76208. 1 interaction.
STRINGi511145.b1726.

Proteomic databases

PaxDbiP76208.
PRIDEiP76208.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74796; AAC74796; b1726.
BAE76510; BAE76510; BAE76510.
GeneIDi945140.
KEGGiecj:JW1715.
eco:b1726.
PATRICi32118759. VBIEscCol129921_1797.

Organism-specific databases

EchoBASEiEB3743.
EcoGeneiEG13987. yniB.

Phylogenomic databases

eggNOGiENOG4107PN8. Bacteria.
ENOG410YJ19. LUCA.
HOGENOMiHOG000121041.
OMAiMVRFNTP.
OrthoDBiEOG6ZPT00.

Enzyme and pathway databases

BioCyciEcoCyc:G6931-MONOMER.
ECOL316407:JW1715-MONOMER.

Miscellaneous databases

PROiP76208.

Family and domain databases

InterProiIPR025229. YniB-like.
[Graphical view]
PfamiPF14002. YniB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYNIB_ECOLI
AccessioniPrimary (citable) accession number: P76208
Secondary accession number(s): Q2MB46
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.