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Protein

Putative ankyrin repeat protein B

Gene

arpB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6926-MONOMER.
EcoCyc:G6927-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ankyrin repeat protein B
Gene namesi
Name:arpB
Ordered Locus Names:b4494, JW5278/JW1710
ORF Names:b1720/b1721
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318 Componenti: Chromosome UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13983. arpB.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 632632Putative ankyrin repeat protein BPRO_0000067229Add
BLAST

Proteomic databases

PRIDEiP76205.

Expressioni

Gene expression databases

GenevestigatoriP76205.

Interactioni

Protein-protein interaction databases

DIPiDIP-9160N.
IntActiP76205. 2 interactions.

Structurei

3D structure databases

ProteinModelPortaliP76205.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati398 – 42730ANK 1Add
BLAST
Repeati446 – 47631ANK 2Add
BLAST
Repeati542 – 57130ANK 3Add
BLAST

Sequence similaritiesi

Contains 3 ANK repeats.Curated

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

HOGENOMiHOG000051632.
InParanoidiP76205.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR012927. Toxin_15_N.
[Graphical view]
PfamiPF07906. Toxin_15. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 4 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.

Sequencei

Sequence statusi: Complete.

P76205-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQNDIIIRT HYKSPHRLHI DSDIPTPSSE PINQFARQLI TLLDTSDLSS
60 70 80 90 100
MLSYCVTQEF TANCRKISQN CYSTALFTIN FATSPIHTEN ILITLHYKKE
110 120 130 140 150
IISLLLETTP IKANHLRSIL DYIEQEQLTA EDRNHCMKLS KXSIEKKTIH
160 170 180 190 200
PTVNLNGSAC FLQSPSDAIF CRHLSLQYAL DSLRNGKGKV NLIKHYSSVE
210 220 230 240 250
SIQQHVPLVR DAEFRALLRH PPAGSRVIAS KDFGFALDIF FCRMMANNVS
260 270 280 290 300
HMSAILYIDN HTLSVRLRIK QSVYGQLNYV VSVYDPNDTN VAVRDTHRTA
310 320 330 340 350
RGFLSLDKFI SSGPDAQTWA DRYVRNCAIA ILPLLPVGVP GAIFAGIASR
360 370 380 390 400
MPFAPIHPSA MLLIMATGQS QQLITLFKQL PILPEKEIIE IITAQNSVGT
410 420 430 440 450
PALFLAMMNG HTDNVKIFMQ EIQSLVDNHI IHEDNLVKLL QTKSANETPG
460 470 480 490 500
LYISMLYGFD EIIDIFLNAL TTPIAQELLN KKLVMSILAM KIHDGEPGLY
510 520 530 540 550
AAMENNHPLC VTRFLSKING IAFKYKLSKA NIMDLLKGAT AQGTPALYIA
560 570 580 590 600
MSKGNEDVVL SYISTLGAFA KKHSFSQHQL FTLLAAKNHD NMSAVHIAIH
610 620 630
HKHYKTVETY YAAINAISQS LSFSADEIKT YL
Length:632
Mass (Da):70,650
Last modified:December 1, 2000 - v2
Checksum:iD16C65DAC90B34EC
GO

Sequence cautioni

The sequence AP009048 differs from that shown. Reason: Frameshift at position 142. Curated
The sequence U00096 differs from that shown. Reason: Frameshift at position 142. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliP76205.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-9160N.
IntActiP76205. 2 interactions.

Proteomic databases

PRIDEiP76205.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB3739.
EcoGeneiEG13983. arpB.

Phylogenomic databases

HOGENOMiHOG000051632.
InParanoidiP76205.

Enzyme and pathway databases

BioCyciEcoCyc:G6926-MONOMER.
EcoCyc:G6927-MONOMER.

Gene expression databases

GenevestigatoriP76205.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR012927. Toxin_15_N.
[Graphical view]
PfamiPF07906. Toxin_15. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 4 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiARPB_ECOLI
AccessioniPrimary (citable) accession number: P76205
Secondary accession number(s): P77764
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: January 7, 2015
This is version 96 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene. A frameshift in position 142 produces two separate ORFs.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.