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Protein

Uncharacterized transporter YdhK

Gene

ydhK

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciEcoCyc:G6885-MONOMER.
ECOL316407:JW1637-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transporter YdhK
Gene namesi
Name:ydhK
Ordered Locus Names:b1645, JW1637
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13945. ydhK.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei23 – 4220HelicalSequence analysisAdd
BLAST
Transmembranei47 – 6923HelicalSequence analysisAdd
BLAST
Transmembranei76 – 9823HelicalSequence analysisAdd
BLAST
Transmembranei118 – 14023HelicalSequence analysisAdd
BLAST
Transmembranei153 – 17018HelicalSequence analysisAdd
BLAST
Transmembranei381 – 40323HelicalSequence analysisAdd
BLAST
Transmembranei410 – 43223HelicalSequence analysisAdd
BLAST
Transmembranei437 – 45418HelicalSequence analysisAdd
BLAST
Transmembranei461 – 48323HelicalSequence analysisAdd
BLAST
Transmembranei493 – 51018HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 670670Uncharacterized transporter YdhKPRO_0000210093Add
BLAST

Proteomic databases

PaxDbiP76186.
PRIDEiP76186.

Interactioni

Protein-protein interaction databases

BioGridi4263048. 181 interactions.
IntActiP76186. 5 interactions.
STRINGi511145.b1645.

Structurei

3D structure databases

ProteinModelPortaliP76186.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105DSW. Bacteria.
COG1289. LUCA.
HOGENOMiHOG000283450.
InParanoidiP76186.
OMAiLCTWACA.
PhylomeDBiP76186.

Family and domain databases

InterProiIPR006726. PHBA_efflux_AaeB/fusaric-R.
[Graphical view]
PfamiPF04632. FUSC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76186-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNASSWSLRN LPWFRATLAQ WRYALRNTIA MCLALTVAYY LNLDEPYWAM
60 70 80 90 100
TSAAVVSFPT VGGVISKSLG RIAGSLLGAI AALLLAGHTL NEPWFFLLSM
110 120 130 140 150
SAWLGFCTWA CAHFTNNVAY AFQLAGYTAA IIAFPMVNIT EASQLWDIAQ
160 170 180 190 200
ARVCEVIVGI LCGGMMMMIL PSSSDATALL TALKNMHARL LEHASLLWQP
210 220 230 240 250
ETTDAIRAAH EGVIGQILTM NLLRIQAFWS HYRFRQQNAR LNALLHQQLR
260 270 280 290 300
MTSVISSLRR MLLNWPSPPG ATREILEQLL TALASSQTDV YTVARIIAPL
310 320 330 340 350
RPTNVADYRH VAFWQRLRYF CRLYLQSSQE LHRLQSGVDD HTRLPRTSGL
360 370 380 390 400
ARHTDNAEAM WSGLRTFCTL MMIGAWSIAS QWDAGANALT LAAISCVLYS
410 420 430 440 450
AVAAPFKSLS LLMRTLVLLS LFSFVVKFGL MVQISDLWQF LLFLFPLLAT
460 470 480 490 500
MQLLKLQMPK FAALWGQLIV FMGSFIAVTN PPVYDFADFL NDNLAKIVGV
510 520 530 540 550
ALAWLAFAIL RPGSDARKSR RHIRALRRDF VDQLSRHPTL SESEFESLTY
560 570 580 590 600
HHVSQLSNSQ DALARRWLLR WGVVLLNCSH VVWQLRDWES RSDPLSRVRD
610 620 630 640 650
NCISLLRGVM SERGVQQKSL AATLEELQRI CDSLARHHQP AARELAAIVW
660 670
RLYCSLSQLE QAPPQGTLAS
Length:670
Mass (Da):75,267
Last modified:February 1, 1997 - v1
Checksum:i285C136651DD5EFA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74717.1.
AP009048 Genomic DNA. Translation: BAA15405.1.
PIRiG64921.
RefSeqiNP_416162.1. NC_000913.3.
WP_000994333.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74717; AAC74717; b1645.
BAA15405; BAA15405; BAA15405.
GeneIDi946528.
KEGGiecj:JW1637.
eco:b1645.
PATRICi32118592. VBIEscCol129921_1716.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74717.1.
AP009048 Genomic DNA. Translation: BAA15405.1.
PIRiG64921.
RefSeqiNP_416162.1. NC_000913.3.
WP_000994333.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76186.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263048. 181 interactions.
IntActiP76186. 5 interactions.
STRINGi511145.b1645.

Proteomic databases

PaxDbiP76186.
PRIDEiP76186.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74717; AAC74717; b1645.
BAA15405; BAA15405; BAA15405.
GeneIDi946528.
KEGGiecj:JW1637.
eco:b1645.
PATRICi32118592. VBIEscCol129921_1716.

Organism-specific databases

EchoBASEiEB3703.
EcoGeneiEG13945. ydhK.

Phylogenomic databases

eggNOGiENOG4105DSW. Bacteria.
COG1289. LUCA.
HOGENOMiHOG000283450.
InParanoidiP76186.
OMAiLCTWACA.
PhylomeDBiP76186.

Enzyme and pathway databases

BioCyciEcoCyc:G6885-MONOMER.
ECOL316407:JW1637-MONOMER.

Miscellaneous databases

PROiP76186.

Family and domain databases

InterProiIPR006726. PHBA_efflux_AaeB/fusaric-R.
[Graphical view]
PfamiPF04632. FUSC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYDHK_ECOLI
AccessioniPrimary (citable) accession number: P76186
Secondary accession number(s): P76894
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 16, 2002
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.