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Protein

Protein YdgH

Gene

ydgH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6860-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YdgH
Gene namesi
Name:ydgH
Ordered Locus Names:b1604, JW1596
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13929 ydgH

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_000001385020 – 314Protein YdgHAdd BLAST295

Proteomic databases

EPDiP76177
PaxDbiP76177
PRIDEiP76177

Interactioni

Protein-protein interaction databases

BioGridi42591261 interactor.
DIPiDIP-11716N
IntActiP76177 4 interactors.
STRINGi316385.ECDH10B_1737

Structurei

3D structure databases

ProteinModelPortaliP76177
SMRiP76177
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YjfY.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105C5D Bacteria
ENOG410XNQU LUCA
HOGENOMiHOG000120852
OMAiFYIVRQV

Family and domain databases

Gene3Di3.30.1660.103 hits
InterProiView protein in InterPro
IPR025543 Dodecin-like
IPR010854 DUF1471
IPR025539 YdgH
IPR036275 YdgH-like_sf
PfamiView protein in Pfam
PF07338 DUF1471, 3 hits
PIRSFiPIRSF014774 YdgH, 1 hit
SUPFAMiSSF159871 SSF159871, 3 hits

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P76177-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLKNTLLAS ALLSAMAFSV NAATELTPEQ AAAVKPFDRV VVTGRFNAIG
60 70 80 90 100
EAVKAVSRRA DKEGAASFYV VDTSDFGNSG NWRVVADLYK ADAEKAEETS
110 120 130 140 150
NRVINGVVEL PKDQAVLIEP FDTVTVQGFY RSQPEVNDAI TKAAKAKGAY
160 170 180 190 200
SFYIVRQIDA NQGGNQRITA FIYKKDAKKR IVQSPDVIPA DSEAGRAALA
210 220 230 240 250
AGGEAAKKVE IPGVATTASP SSEVGRFFET QSSKGGRYTV TLPDGTKVEE
260 270 280 290 300
LNKATAAMMV PFDSIKFSGN YGNMTEVSYQ VAKRAAKKGA KYYHITRQWQ
310
ERGNNLTVSA DLYK
Length:314
Mass (Da):33,903
Last modified:February 1, 1997 - v1
Checksum:iAFD788B9CC41971A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74676.1
AP009048 Genomic DNA Translation: BAE76481.1
PIRiF64916
RefSeqiNP_416121.1, NC_000913.3
WP_000769303.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74676; AAC74676; b1604
BAE76481; BAE76481; BAE76481
GeneIDi945117
KEGGiecj:JW1596
eco:b1604
PATRICifig|511145.12.peg.1675

Similar proteinsi

Entry informationi

Entry nameiYDGH_ECOLI
AccessioniPrimary (citable) accession number: P76177
Secondary accession number(s): Q2MB75
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome