P76172 (YNFD_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein YnfD

Gene names

Name:	ynfD
Ordered Locus Names:	b1586, JW5259

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	101 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

Ontologies

Keywords
Domain	Signal
Technical term	Complete proteome Direct protein sequencing Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Ref.3
	Chain	22 – 101	80	Uncharacterized protein YnfD		PRO_0000013849

Sequences

	Sequence		Length	Mass (Da)
	P76172 [UniParc]. Last modified December 12, 2006. Version 2. Checksum: A03332ECCC21FFAA	FASTA	101	10,477
	10 20 30 40 50 60 MKLSTCCAAL LLALASPAVL AAPGSCERIQ SDISQRIINN GVPESSFTLS IVPNDQVDQP 70 80 90 100 DSQVVGHCAN DTHKILYTRT TSGNVSAPAQ SSQDGAPAEP Q

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	"Small genes/gene-products in Escherichia coli K-12." Wasinger V.C., Humphery-Smith I. FEMS Microbiol. Lett. 169:375-382(1998) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 22-33.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00096 Genomic DNA. Translation: AAC74658.2. AP009048 Genomic DNA. Translation: BAE76479.1.
PIR	D64914.
RefSeq	NP_416103.2. NC_000913.2. YP_489849.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P76172.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-12764N.
IntAct	P76172. 1 interaction.
STRING	511145.b1586.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC74658; AAC74658; b1586. BAE76479; BAE76479; BAE76479.
GeneID	12932520. 946133.
KEGG	ecj:Y75_p1562. eco:b1586.
PATRIC	32118474. VBIEscCol129921_1657.
Organism-specific databases
EchoBASE	EB3603.
EcoGene	EG13842. ynfD.
Phylogenomic databases
eggNOG	NOG43710.
HOGENOM	HOG000120817.
OMA	DQPDAQV.
ProtClustDB	CLSK880138.
Enzyme and pathway databases
BioCyc	EcoCyc:G6844-MONOMER. ECOL316407:JW5259-MONOMER.
Gene expression databases
Genevestigator	P76172.
Family and domain databases
InterPro	IPR010595. DUF1161. [Graphical view]
Pfam	PF06649. DUF1161. 1 hit. [Graphical view]
ProDom	PD336997. DUF1161. 1 hit. [Graphical view] [Entries sharing at least one domain]
ProtoNet	Search...

Entry information

Entry name

YNFD_ECOLI

Accession

Primary (citable) accession number: P76172
Secondary accession number(s): Q2MB77

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 15, 1998
Last sequence update:	December 12, 2006
Last modified:	May 1, 2013
This is version 79 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program