Reviewed, UniProtKB/Swiss-Prot P76170 (YNFB_ECOLI)

Names and origin

Protein names

Recommended name:
    UPF0482 protein ynfB

Gene names

Name:	ynfB
Ordered Locus Names:	b1583, JW1575

Organism

Escherichia coli (strain K12) [Complete proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	113 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the UPF0482 family.

Ontologies

Keywords
Domain	Signal
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
aceE	P0AFG8	1	EBI-544774,EBI-542683

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 28	28	Potential
	Chain	29 – 113	85	UPF0482 protein ynfB HAMAP MF_01581		PRO_0000013848

Sequences

	Sequence		Length	Mass (Da)
	P76170-1 [UniParc]. Last modified February 1, 1997. Version 1. Checksum: 54CD449B384A7418	FASTA	113	12,909
	10 20 30 40 50 60 MKITLSKRIG LLAILLPCAL ALSTTVHAET NKLVIESGDS AQSRQHAAME KEQWNDTRNL 70 80 90 100 110 RQKVNKRTEK EWDKADAAFD NRDKCEQSAN INAYWEPNTL RCLDRRTGRV ITP

References

[1]

"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.

[2]

"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U00096 Genomic DNA. Translation: AAC74655.1. AP009048 Genomic DNA. Translation: BAE76477.1.
PIR	A64914.
RefSeq	AP_002204.1. NP_416100.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:12762N.
IntAct	P76170. 3 interactions.
Genome annotation databases
GeneID	946119.
GenomeReviews	Gene locus JW1575 in contig AP009048_GR. Gene locus b1583 in contig U00096_GR.
KEGG	ecj:JW1575. eco:b1583.
Organism-specific databases
EchoBASE	EB3601.
EcoGene	EG13840. ynfB.
CMR	Search...
Phylogenomic databases
HOGENOM	P76170.
OMA	P76170. ANVNAYW.
Enzyme and pathway databases
BioCyc	EcoCyc:G6841-MON.
Family and domain databases
HAMAP	MF_01581. [Tree]
InterPro	IPR009700. DUF1283. [Graphical view]
Pfam	PF06932. DUF1283. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YNFB_ECOLI

Accession

Primary (citable) accession number: P76170
Secondary accession number(s): Q2MB79

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 15, 1998
Last sequence update:	February 1, 1997
Last modified:	June 16, 2009
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)