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Protein

UPF0482 protein YnfB

Gene

ynfB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6841-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0482 protein YnfBUniRule annotation
Gene namesi
Name:ynfBUniRule annotation
Ordered Locus Names:b1583, JW1575
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13840 ynfB

Subcellular locationi

GO - Cellular componenti

  • cell outer membrane Source: EcoCyc

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28UniRule annotationAdd BLAST28
ChainiPRO_000001384829 – 113UPF0482 protein YnfBAdd BLAST85

Proteomic databases

PaxDbiP76170
PRIDEiP76170

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
aceEP0AFG82EBI-544774,EBI-542683

Protein-protein interaction databases

BioGridi4260818, 30 interactors
DIPiDIP-12762N
IntActiP76170, 3 interactors
STRINGi316385.ECDH10B_1716

Structurei

3D structure databases

ProteinModelPortaliP76170
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0482 family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105M5Q Bacteria
ENOG4111VZ1 LUCA
HOGENOMiHOG000059285
OMAiDKEQWND

Family and domain databases

HAMAPiMF_01581 UPF0482, 1 hit
InterProiView protein in InterPro
IPR009700 DUF1283
PfamiView protein in Pfam
PF06932 DUF1283, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD073251 DUF1283, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P76170-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKITLSKRIG LLAILLPCAL ALSTTVHAET NKLVIESGDS AQSRQHAAME
60 70 80 90 100
KEQWNDTRNL RQKVNKRTEK EWDKADAAFD NRDKCEQSAN INAYWEPNTL
110
RCLDRRTGRV ITP
Length:113
Mass (Da):12,909
Last modified:February 1, 1997 - v1
Checksum:i54CD449B384A7418
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74655.1
AP009048 Genomic DNA Translation: BAE76477.1
PIRiA64914
RefSeqiNP_416100.1, NC_000913.3
WP_000705211.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74655; AAC74655; b1583
BAE76477; BAE76477; BAE76477
GeneIDi946119
KEGGiecj:JW1575
eco:b1583
PATRICifig|511145.12.peg.1654

Similar proteinsi

Entry informationi

Entry nameiYNFB_ECOLI
AccessioniPrimary (citable) accession number: P76170
Secondary accession number(s): Q2MB79
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health