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Protein

Putative uncharacterized protein YddK

Gene

yddK

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6772-MONOMER.
ECOL316407:JW1467-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YddK
Gene namesi
Name:yddK
Ordered Locus Names:b1471, JW1467
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13782. yddK.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001689451 – 318Putative uncharacterized protein YddKAdd BLAST318

Interactioni

Protein-protein interaction databases

BioGridi4260207. 12 interactors.
STRINGi316407.85674981.

Structurei

3D structure databases

ProteinModelPortaliP76123.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati109 – 129LRR 1Add BLAST21
Repeati130 – 151LRR 2Add BLAST22
Repeati153 – 173LRR 3Add BLAST21
Repeati174 – 194LRR 4Add BLAST21
Repeati195 – 216LRR 5Add BLAST22
Repeati217 – 237LRR 6Add BLAST21
Repeati238 – 258LRR 7Add BLAST21
Repeati260 – 280LRR 8Add BLAST21
Repeati284 – 305LRR 9Add BLAST22

Sequence similaritiesi

Contains 9 LRR (leucine-rich) repeats.Curated

Keywords - Domaini

Leucine-rich repeat, Repeat

Phylogenomic databases

eggNOGiENOG4108UI3. Bacteria.
COG4886. LUCA.
HOGENOMiHOG000009463.
InParanoidiP76123.
OMAiFLTIMNN.
PhylomeDBiP76123.

Family and domain databases

Gene3Di3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 2 hits.
PROSITEiPS51450. LRR. 8 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76123-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MITDLILHNH PRMKTITLND NHIAHLNAKN TTKLEYLNLS NNNLLPTNDI
60 70 80 90 100
DQLISSKHLW HVLVNGINND PLAQMQYWTA VRNIIDDTNE VTIDLSGLNL
110 120 130 140 150
TTQPPGLQNF TSINLDNNQF THFDATNYDR LVKLSLNSNA LESINFPQGR
160 170 180 190 200
NVSITHISMN NNALRNIDID RLSSVTYFSA AHNQLEFVQL ESCEWLQYLN
210 220 230 240 250
LSHNQLTDIV AGNKNELLLL DLSHNKLTSL HNDLFPNLNT LLINNNLLSE
260 270 280 290 300
IKIFYSNFCN VQTLNAANNQ LKYINLDFLT YLPSIKSLRL DNNKITHIDT
310
NNTSDIGTLF PIIKQSKT
Length:318
Mass (Da):36,241
Last modified:February 1, 1997 - v1
Checksum:iB2ED1E202A43A753
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76450.1.
PIRiB64900.

Genome annotation databases

EnsemblBacteriaiBAE76450; BAE76450; BAE76450.
KEGGiecj:JW1467.
PATRICi48662249. VBIEscCol107702_1486.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76450.1.
PIRiB64900.

3D structure databases

ProteinModelPortaliP76123.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260207. 12 interactors.
STRINGi316407.85674981.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE76450; BAE76450; BAE76450.
KEGGiecj:JW1467.
PATRICi48662249. VBIEscCol107702_1486.

Organism-specific databases

EchoBASEiEB3544.
EcoGeneiEG13782. yddK.

Phylogenomic databases

eggNOGiENOG4108UI3. Bacteria.
COG4886. LUCA.
HOGENOMiHOG000009463.
InParanoidiP76123.
OMAiFLTIMNN.
PhylomeDBiP76123.

Enzyme and pathway databases

BioCyciEcoCyc:G6772-MONOMER.
ECOL316407:JW1467-MONOMER.

Family and domain databases

Gene3Di3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 2 hits.
PROSITEiPS51450. LRR. 8 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYDDK_ECOLI
AccessioniPrimary (citable) accession number: P76123
Secondary accession number(s): Q2MBA6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.