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Protein

Uncharacterized protein YddH

Gene

yddH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

FMNBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Flavoprotein, FMN

Enzyme and pathway databases

BioCyciEcoCyc:G6769-MONOMER.
ECOL316407:JW1457-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YddH
Gene namesi
Name:yddH
Ordered Locus Names:b1462, JW1457
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13779. yddH.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 189189Uncharacterized protein YddHPRO_0000085525Add
BLAST

Proteomic databases

PaxDbiP76121.
PRIDEiP76121.

Interactioni

Protein-protein interaction databases

BioGridi4262038. 7 interactions.
IntActiP76121. 13 interactions.
STRINGi511145.b1462.

Structurei

3D structure databases

ProteinModelPortaliP76121.
SMRiP76121. Positions 7-188.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the flavoredoxin family.Curated

Phylogenomic databases

eggNOGiENOG4108MEJ. Bacteria.
COG1853. LUCA.
HOGENOMiHOG000115782.
InParanoidiP76121.
OMAiWAMPLDF.
OrthoDBiEOG6N949C.
PhylomeDBiP76121.

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
InterProiIPR002563. Flavin_Rdtase-like_dom.
IPR012349. Split_barrel_FMN-bd.
[Graphical view]
PfamiPF01613. Flavin_Reduct. 1 hit.
[Graphical view]
SMARTiSM00903. Flavin_Reduct. 1 hit.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.

Sequencei

Sequence statusi: Complete.

P76121-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRFIPIELH HASRLLNHGP TVLITSFDEQ SQRRNIMAAA WSMPVEFEPP
60 70 80 90 100
RVAIVVDKST WTRELIEHNG KFGIVIPGVA ATNWTWAVGS VSGRDEDKFN
110 120 130 140 150
CYGIPVVRGP VFGLPLVEEK CLAWMECRLL PATSAQEEYD TLFGEVVSAA
160 170 180
ADARVFVEGR WQFDDDKLNT LHHLGAGTFV TSGKRVTAG
Length:189
Mass (Da):20,967
Last modified:February 21, 2001 - v2
Checksum:iE7415CA56C864565
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74544.2.
AP009048 Genomic DNA. Translation: BAE76448.1.
PIRiA64899.
RefSeqiNP_415979.2. NC_000913.3.
WP_000085899.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74544; AAC74544; b1462.
BAE76448; BAE76448; BAE76448.
GeneIDi946192.
KEGGiecj:JW1457.
eco:b1462.
PATRICi32118216. VBIEscCol129921_1528.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74544.2.
AP009048 Genomic DNA. Translation: BAE76448.1.
PIRiA64899.
RefSeqiNP_415979.2. NC_000913.3.
WP_000085899.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76121.
SMRiP76121. Positions 7-188.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262038. 7 interactions.
IntActiP76121. 13 interactions.
STRINGi511145.b1462.

Proteomic databases

PaxDbiP76121.
PRIDEiP76121.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74544; AAC74544; b1462.
BAE76448; BAE76448; BAE76448.
GeneIDi946192.
KEGGiecj:JW1457.
eco:b1462.
PATRICi32118216. VBIEscCol129921_1528.

Organism-specific databases

EchoBASEiEB3541.
EcoGeneiEG13779. yddH.

Phylogenomic databases

eggNOGiENOG4108MEJ. Bacteria.
COG1853. LUCA.
HOGENOMiHOG000115782.
InParanoidiP76121.
OMAiWAMPLDF.
OrthoDBiEOG6N949C.
PhylomeDBiP76121.

Enzyme and pathway databases

BioCyciEcoCyc:G6769-MONOMER.
ECOL316407:JW1457-MONOMER.

Miscellaneous databases

PROiP76121.

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
InterProiIPR002563. Flavin_Rdtase-like_dom.
IPR012349. Split_barrel_FMN-bd.
[Graphical view]
PfamiPF01613. Flavin_Reduct. 1 hit.
[Graphical view]
SMARTiSM00903. Flavin_Reduct. 1 hit.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYDDH_ECOLI
AccessioniPrimary (citable) accession number: P76121
Secondary accession number(s): Q2MBA8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 21, 2001
Last modified: January 20, 2016
This is version 98 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.