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Protein

Putative transposase YncI

Gene

yncI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein uncertaini

Functioni

Caution

Could be the product of a pseudogene.Curated

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processDNA recombination, Transposition

Enzyme and pathway databases

BioCyciEcoCyc:G6767-MONOMER
EcoCyc:G6768-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative transposase YncI
Gene namesi
Name:yncI
Synonyms:yncM
Ordered Locus Names:b1459, JW1453/JW5237
ORF Names:b1458
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14258 yncI

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002461451 – 374Putative transposase YncIAdd BLAST374

Proteomic databases

PRIDEiP76119

Interactioni

Protein-protein interaction databases

BioGridi4262888, 52 interactors
4262889, 186 interactors
DIPiDIP-28080N
IntActiP76119, 1 interactor
STRINGi316407.85674976

Structurei

3D structure databases

ProteinModelPortaliP76119
SMRiP76119
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the transposase 11 family.Curated

Phylogenomic databases

eggNOGiCOG5433 LUCA
HOGENOMiHOG000042098
InParanoidiP76119
OMAiVENELHW
PhylomeDBiP76119

Family and domain databases

InterProiView protein in InterPro
IPR002559 Transposase_11
IPR032806 YbfD_N
PfamiView protein in Pfam
PF01609 DDE_Tnp_1, 1 hit
PF13808 DDE_Tnp_1_assoc, 1 hit

Sequencei

Sequence statusi: Complete.

P76119-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIQSLLDYI SVTPDIRQQG KVKHKLSAIL FLTVCAVIAG ADEWQEIEDF
60 70 80 90 100
GHERLEWLKK YGDFDNGIPV DDTIARVVSN IDSLAFEKMF IEWMQECHEI
110 120 130 140 150
TDGEIIAIDG KTIRGSFDKG KRKGAIHMVS AFSNENGVVL GQVKTEAKSN
160 170 180 190 200
EITAIPELLN LLYLKKNLIT IDAMGCQKDI ASKIKDKKAD YLLAVKGNQG
210 220 230 240 250
KLHHAFEEKF PVNVFSNYKG DSFSTQEISH GRKETRLHIV SNVTRLNFCD
260 270 280 290 300
FEFEWKGLKK LCVALSFRQK KEDKSAEGVS IRYYISSKDM DAKEFAHAIR
310 320 330 340 350
AHWLIEHSLH WVLDVKMNED ASRIRRGNAA EIISGIKKMA LNLLRDCKDI
360 370
KGEEEKKEGC VKHRERSSEV HFLY
Length:374
Mass (Da):42,653
Last modified:November 28, 2006 - v2
Checksum:i1B320125007E2BAE
GO

Sequence cautioni

The sequence BAA15089 differs from that shown. Reason: Frameshift at position 245.Curated
The sequence BAA15090 differs from that shown. Reason: Erroneous termination at position 331. Translated as Glu.Curated
The sequence U00096 differs from that shown. Reason: Erroneous termination at position 331. Translated as Glu.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA No translation available.
AP009048 Genomic DNA Translation: BAA15089.2 Frameshift.
AP009048 Genomic DNA Translation: BAA15090.2 Sequence problems.
PIRiE64898
F64898

Genome annotation databases

EnsemblBacteriaiBAA15089; BAA15089; BAA15089
BAA15090; BAA15090; BAA15090
KEGGiecj:JW1453
ecj:JW5237

Similar proteinsi

Entry informationi

Entry nameiYNCI_ECOLI
AccessioniPrimary (citable) accession number: P76119
Secondary accession number(s): P76120, Q79EJ9, Q79EK0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 25, 2006
Last sequence update: November 28, 2006
Last modified: May 23, 2018
This is version 102 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome, Transposable element

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