Skip Header

Contribute Send feedback
Read comments (?) or add your own

P76091 (YNBB_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 97. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YnbB
Gene names
Name:ynbB
Ordered Locus Names:b1409, JW1406
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length298 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the CDS family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 298298Uncharacterized protein YnbB
PRO_0000090759

Regions

Transmembrane5 – 2521Helical; Potential
Transmembrane52 – 7221Helical; Potential
Transmembrane105 – 12521Helical; Potential
Transmembrane138 – 15821Helical; Potential
Transmembrane163 – 18321Helical; Potential
Transmembrane208 – 22821Helical; Potential
Transmembrane236 – 25621Helical; Potential
Transmembrane273 – 29321Helical; Potential

Experimental info

Sequence conflict1871W → M Ref.3
Sequence conflict1901S → I Ref.3

Sequences

Sequence LengthMass (Da)Tools
P76091 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 8083BA7E3C07FADF

FASTA29833,054
        10         20         30         40         50         60 
MLEKSLATLF ALLILATLIN RFLLWRLPER KGGEVTLRIR TWWGIVICFS MVISGPRWMT 

        70         80         90        100        110        120 
LTFFALISFL ALKEYCTLIS VHFPRWLYWG IPLNYLLIGF NCFELFLLFI PLAGFLILAT 

       130        140        150        160        170        180 
GQVLVGDPSG FLHTVSAIFW GWIMTVFALS HAAWLLMLPT TNIQGGALLV LFLLALTESN 

       190        200        210        220        230        240 
DIAQYLWGKS CGRRKVVPKV SPGKTLEGLM GGVITIMIAS LIIGPLLTPL NTLQALLAGL 

       250        260        270        280        290 
LIGISGFCGD VVMSAIKRDI GVKDSGKLLP GHGGLLDRID SLIFTAPVFF YFIRYCCY

« Hide

References

[1]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], SEQUENCE REVISION TO 187 AND 190.
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]"A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map."
Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T., Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K. expand/collapse author list , Nakade S., Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y., Wada C., Yamamoto Y., Horiuchi T.
DNA Res. 3:363-377(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 187-298.
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U00096 Genomic DNA. Translation: AAC74491.1.
AP009048 Genomic DNA. Translation: BAA15023.2.
PIRD64892.
RefSeqNP_415927.1. NC_000913.2.
YP_489676.1. NC_007779.1.

3D structure databases

ProteinModelPortalP76091.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP-12743N.
IntActP76091. 1 interaction.
STRING511145.b1409.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC74491; AAC74491; b1409.
BAA15023; BAA15023; BAA15023.
GeneID12934028.
945972.
KEGGecj:Y75_p1385.
eco:b1409.
PATRIC32118104. VBIEscCol129921_1472.

Organism-specific databases

EchoBASEEB3512.
EcoGeneEG13749. ynbB.

Phylogenomic databases

eggNOGCOG4589.
HOGENOMHOG000259010.
KOK00981.
OMAMALWWIT.
ProtClustDBCLSK880082.

Enzyme and pathway databases

BioCycEcoCyc:G6728-MONOMER.
ECOL316407:JW1406-MONOMER.

Gene expression databases

GenevestigatorP76091.

Family and domain databases

InterProIPR000374. PC_trans.
[Graphical view]
PfamPF01148. CTP_transf_1. 1 hit.
[Graphical view]
PROSITEPS01315. CDS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYNBB_ECOLI
AccessionPrimary (citable) accession number: P76091
Secondary accession number(s): P78229
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: May 1, 2013
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents