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Protein

Prophage side tail fiber protein homolog StfR

Gene

stfR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6695-MONOMER.
ECOL316407:JW1366-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Prophage side tail fiber protein homolog StfRCurated
Alternative name(s):
Side tail fiber protein homolog from lambdoid prophage Rac
Gene namesi
Name:stfR
Synonyms:ynaB
Ordered Locus Names:b1372, JW1366
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13370. stfR.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000777431 – 1120Prophage side tail fiber protein homolog StfRAdd BLAST1120

Proteomic databases

PaxDbiP76072.
PRIDEiP76072.

Interactioni

Protein-protein interaction databases

BioGridi4260171. 142 interactors.
DIPiDIP-10932N.
IntActiP76072. 16 interactors.
STRINGi511145.b1372.

Structurei

3D structure databases

ProteinModelPortaliP76072.
SMRiP76072.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the tail fiber family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4108X9F. Bacteria.
ENOG4111PZP. LUCA.
HOGENOMiHOG000120054.
OMAiTECINAR.

Family and domain databases

Gene3Di2.60.40.1120. 1 hit.
3.90.1340.10. 1 hit.
InterProiIPR008969. CarboxyPept-like_regulatory.
IPR014766. CarboxyPept_regulatory_dom.
IPR013609. Phage_933W_L0121_N.
IPR005003. Phage_lambda_Stf-r1.
IPR011083. Phage_tail_collar_dom.
[Graphical view]
PfamiPF07484. Collar. 1 hit.
PF03335. Phage_fiber. 6 hits.
PF08400. phage_tail_N. 1 hit.
[Graphical view]
SUPFAMiSSF49464. SSF49464. 1 hit.

Sequencei

Sequence statusi: Complete.

P76072-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVKISGVLK DGTGKPVQNC TIQLKAKRNS TTVVVNTLAS ENPDEAGRYS
60 70 80 90 100
MDVEYGQYSV ILLVEGFPPS HAGTITVYED SQPGTLNDFL GAMTEDDARP
110 120 130 140 150
EALRRFELMV EEVARNASAV AQNTAAAKKS ASDASTSARE AATHAADAAD
160 170 180 190 200
SARAASTSAG QAASSAQSAS SSAGTASTKA TEASKSAAAA ESSKSAAATS
210 220 230 240 250
AGAAKTSETN ASASLQSAAT SASTATTKAS EAATSARDAA ASKEAAKSSE
260 270 280 290 300
TNASSSASSA ASSATAAGNS AKAAKTSETN ARSSETAAGQ SASAAAGSKT
310 320 330 340 350
AAASSASAAS TSAGQASASA TAAGKSAESA ASSASTATTK AGEATEQASA
360 370 380 390 400
AARSASAAKT SETNAKASET SAESSKTAAA SSASSAASSA SSASASKDEA
410 420 430 440 450
TRQASAAKSS ATTASTKATE AAGSATAAAQ SKSTAESAAT RAETAAKRAE
460 470 480 490 500
DIASAVALED ASTTKKGIVQ LSSATNSTSE TLAATPKAVK SAYDNAEKRL
510 520 530 540 550
QKDQNGADIP DKGCFLNNIN AVSKTDFADK RGMRYVRVNA PAGATSGKYY
560 570 580 590 600
PVVVMRSAGS VSELASRVII TTATRTAGDP MNNCEFNGFV MPGGWTDRGR
610 620 630 640 650
YAYGMFWQYQ NNERAIHSIM MSNKGDDLRS VFYVDGAAFP VFAFIEDGLS
660 670 680 690 700
ISAPGADLVV NDTTYKFGAT NPATECIAAD VILDFKSGRG FYESHSLIVN
710 720 730 740 750
DNLSCKKLFA TDEIVARGGN QIRMIGGEYG ALWRNDGAKT YLLLTNQGDV
760 770 780 790 800
YGGWNTLRPF AIDNATGELV IGTKLSASLN GNALTATKLQ TPRRVSGVEF
810 820 830 840 850
DGSKDITLTA AHVAAFARRA TDTYADADGG VPWNAESGAY NVTRSGDSYI
860 870 880 890 900
LVNFYTGVGS CRTLQMKAHY RNGGLFYRSS RDGYGFEEDW AEVYTSKNLP
910 920 930 940 950
PESYPVGAPI PWPSDTVPSG YALMQGQAFD KSAYPKLAAA YPSGVIPDMR
960 970 980 990 1000
GWTIKGKPAS GRAVLSQEQD GIKSHTHSAS ASSTDLGTKT TSSFDYGTKS
1010 1020 1030 1040 1050
TNNTGAHTHS VSGSTNSAGA HTHSLANVNT ASANSGAGSA STRLSVVHNQ
1060 1070 1080 1090 1100
NYATSSAGAH THSLSGTAAS AGAHAHTVGI GAHTHSVAIG SHGHTITVNA
1110 1120
AGNAENTVKN IAFNYIVRLA
Length:1,120
Mass (Da):113,780
Last modified:December 1, 2000 - v2
Checksum:i542E59D71EE795B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74454.2.
AP009048 Genomic DNA. Translation: BAA14966.1.
PIRiG64887.
RefSeqiNP_415890.2. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC74454; AAC74454; b1372.
BAA14966; BAA14966; BAA14966.
GeneIDi945207.
KEGGiecj:JW1366.
eco:b1372.
PATRICi32118026. VBIEscCol129921_1433.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74454.2.
AP009048 Genomic DNA. Translation: BAA14966.1.
PIRiG64887.
RefSeqiNP_415890.2. NC_000913.3.

3D structure databases

ProteinModelPortaliP76072.
SMRiP76072.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260171. 142 interactors.
DIPiDIP-10932N.
IntActiP76072. 16 interactors.
STRINGi511145.b1372.

Proteomic databases

PaxDbiP76072.
PRIDEiP76072.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74454; AAC74454; b1372.
BAA14966; BAA14966; BAA14966.
GeneIDi945207.
KEGGiecj:JW1366.
eco:b1372.
PATRICi32118026. VBIEscCol129921_1433.

Organism-specific databases

EchoBASEiEB3152.
EcoGeneiEG13370. stfR.

Phylogenomic databases

eggNOGiENOG4108X9F. Bacteria.
ENOG4111PZP. LUCA.
HOGENOMiHOG000120054.
OMAiTECINAR.

Enzyme and pathway databases

BioCyciEcoCyc:G6695-MONOMER.
ECOL316407:JW1366-MONOMER.

Miscellaneous databases

PROiP76072.

Family and domain databases

Gene3Di2.60.40.1120. 1 hit.
3.90.1340.10. 1 hit.
InterProiIPR008969. CarboxyPept-like_regulatory.
IPR014766. CarboxyPept_regulatory_dom.
IPR013609. Phage_933W_L0121_N.
IPR005003. Phage_lambda_Stf-r1.
IPR011083. Phage_tail_collar_dom.
[Graphical view]
PfamiPF07484. Collar. 1 hit.
PF03335. Phage_fiber. 6 hits.
PF08400. phage_tail_N. 1 hit.
[Graphical view]
SUPFAMiSSF49464. SSF49464. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiSTFR_ECOLI
AccessioniPrimary (citable) accession number: P76072
Secondary accession number(s): P77560
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: November 2, 2016
This is version 120 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.