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Protein

Putative uncharacterized protein YdaW

Gene

ydaW

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6685-MONOMER.
ECOL316407:JW5211-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YdaW
Gene namesi
Name:ydaW
Ordered Locus Names:b1361, JW5211
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13365. ydaW.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001689121 – 186Putative uncharacterized protein YdaWAdd BLAST186

Proteomic databases

PRIDEiP76066.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
fldAP619492EBI-9142914,EBI-550021

Protein-protein interaction databases

BioGridi4261619. 170 interactors.
IntActiP76066. 3 interactors.
STRINGi316407.85674925.

Structurei

3D structure databases

ProteinModelPortaliP76066.
SMRiP76066.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000120231.
OMAiKNSATKM.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR012432. DUF1627.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07789. DUF1627. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.

Sequencei

Sequence statusi: Complete.

P76066-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METVFDALKA MGKATSIELA ARLDISREEV LNELWELKKA GFVDKSAYTW
60 70 80 90 100
RVADNNVQQE QPAQAELPEE ITTATVAKIS ECDLTATIEQ RGPQTADELA
110 120 130 140 150
TLFGTTSRKV ASTLAMAISK GRLIRVNQGG KFRYCIPGDN LPAEPKAASV
160 170 180
SPLWLSASSS ACHGVLIITV ITPSPTKNSA TKMPEN
Length:186
Mass (Da):20,050
Last modified:November 30, 2016 - v2
Checksum:iDFB4614430F6AECC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76415.1.
PIRiD64886.

Genome annotation databases

EnsemblBacteriaiBAE76415; BAE76415; BAE76415.
KEGGiecj:JW5211.
PATRICi48662015. VBIEscCol107702_1371.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76415.1.
PIRiD64886.

3D structure databases

ProteinModelPortaliP76066.
SMRiP76066.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261619. 170 interactors.
IntActiP76066. 3 interactors.
STRINGi316407.85674925.

Proteomic databases

PRIDEiP76066.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE76415; BAE76415; BAE76415.
KEGGiecj:JW5211.
PATRICi48662015. VBIEscCol107702_1371.

Organism-specific databases

EchoBASEiEB3148.
EcoGeneiEG13365. ydaW.

Phylogenomic databases

HOGENOMiHOG000120231.
OMAiKNSATKM.

Enzyme and pathway databases

BioCyciEcoCyc:G6685-MONOMER.
ECOL316407:JW5211-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR012432. DUF1627.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07789. DUF1627. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYDAW_ECOLI
AccessioniPrimary (citable) accession number: P76066
Secondary accession number(s): Q2MBE1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 30, 2016
Last modified: November 30, 2016
This is version 96 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

This protein could be 17 residues longer at the N-terminus, but this makes a 9 residue overlap with upstream protein YdaV and consequently the longer version has not been annotated.Curated

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.