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Protein

Uncharacterized protein YcjX

Gene

ycjX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi26 – 338ATPSequence analysis

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:G6659-MONOMER.
ECOL316407:JW1314-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YcjX
Gene namesi
Name:ycjX
Ordered Locus Names:b1321, JW1314
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13921. ycjX.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 465465Uncharacterized protein YcjXPRO_0000168896Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei249 – 2491N6-acetyllysine1 Publication

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiP76046.
PRIDEiP76046.

Interactioni

Protein-protein interaction databases

BioGridi4260148. 10 interactions.
DIPiDIP-11615N.
IntActiP76046. 3 interactions.
STRINGi511145.b1321.

Structurei

3D structure databases

ProteinModelPortaliP76046.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To H.influenzae HI_1637.Curated

Phylogenomic databases

eggNOGiENOG4105CM6. Bacteria.
COG3106. LUCA.
HOGENOMiHOG000276536.
InParanoidiP76046.
KOiK06918.
OMAiFDYPGEW.
OrthoDBiEOG6B09PW.

Family and domain databases

InterProiIPR007413. DUF463_YcjX.
[Graphical view]
PfamiPF04317. DUF463. 1 hit.
[Graphical view]
PIRSFiPIRSF019381. YcjX. 1 hit.

Sequencei

Sequence statusi: Complete.

P76046-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRLKNELNA LVNRGVDRHL RLAVTGLSRS GKTAFITAMV NQLLNIHAGA
60 70 80 90 100
RLPLLSAVRE ERLLGVKRIP QRDFGIPRFT YDEGLAQLYG DPPAWPTPTR
110 120 130 140 150
GVSEIRLALR FKSNDSLLRH FKDTSTLYLE IVDYPGEWLL DLPMLAQDYL
160 170 180 190 200
SWSRQMTGLL NGQRGEWSAK WRMMSEGLDP LAPADENRLA DIAAAWTDYL
210 220 230 240 250
HHCKEQGLHF IQPGRFVLPG DMAGAPALQF FPWPDVDTWG ESKLAQADKH
260 270 280 290 300
TNAGMLRERF NYYCEKVVKG FYKNHFLRFD RQIVLVDCLQ PLNSGPQAFN
310 320 330 340 350
DMRLALTQLM QSFHYGQRTL FRRLFSPVID KLLFAATKAD HVTIDQHANM
360 370 380 390 400
VSLLQQLIQD AWQNAAFEGI SMDCLGLASV QATTSGIIDV NGEKIPALRG
410 420 430 440 450
NRLSDGAPLT VYPGEVPARL PGQAFWDKQG FQFEAFRPQV MDVDKPLPHI
460
RLDAALEFLI GDKLR
Length:465
Mass (Da):52,609
Last modified:February 1, 1997 - v1
Checksum:i5FF02E4F7FA1C10C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74403.1.
AP009048 Genomic DNA. Translation: BAA14902.2.
PIRiD64881.
RefSeqiNP_415837.1. NC_000913.3.
WP_000825775.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74403; AAC74403; b1321.
BAA14902; BAA14902; BAA14902.
GeneIDi945872.
KEGGiecj:JW1314.
eco:b1321.
PATRICi32117916. VBIEscCol129921_1378.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74403.1.
AP009048 Genomic DNA. Translation: BAA14902.2.
PIRiD64881.
RefSeqiNP_415837.1. NC_000913.3.
WP_000825775.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76046.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260148. 10 interactions.
DIPiDIP-11615N.
IntActiP76046. 3 interactions.
STRINGi511145.b1321.

Proteomic databases

PaxDbiP76046.
PRIDEiP76046.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74403; AAC74403; b1321.
BAA14902; BAA14902; BAA14902.
GeneIDi945872.
KEGGiecj:JW1314.
eco:b1321.
PATRICi32117916. VBIEscCol129921_1378.

Organism-specific databases

EchoBASEiEB3680.
EcoGeneiEG13921. ycjX.

Phylogenomic databases

eggNOGiENOG4105CM6. Bacteria.
COG3106. LUCA.
HOGENOMiHOG000276536.
InParanoidiP76046.
KOiK06918.
OMAiFDYPGEW.
OrthoDBiEOG6B09PW.

Enzyme and pathway databases

BioCyciEcoCyc:G6659-MONOMER.
ECOL316407:JW1314-MONOMER.

Miscellaneous databases

PROiP76046.

Family and domain databases

InterProiIPR007413. DUF463_YcjX.
[Graphical view]
PfamiPF04317. DUF463. 1 hit.
[Graphical view]
PIRSFiPIRSF019381. YcjX. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], SEQUENCE REVISION.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli."
    Zhang J., Sprung R., Pei J., Tan X., Kim S., Zhu H., Liu C.F., Grishin N.V., Zhao Y.
    Mol. Cell. Proteomics 8:215-225(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-249, IDENTIFICATION BY MASS SPECTROMETRY.
    Strain: K12 / JW1106 and K12 / MG1655 / ATCC 47076.

Entry informationi

Entry nameiYCJX_ECOLI
AccessioniPrimary (citable) accession number: P76046
Secondary accession number(s): P77411
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.