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Protein

Putative ABC transporter periplasmic-binding protein YcjN

Gene

ycjN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Probably part of the binding-protein-dependent transport system YcjNOP.

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:YCJN-MONOMER

Protein family/group databases

TCDBi3.A.1.1.46 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ABC transporter periplasmic-binding protein YcjN
Gene namesi
Name:ycjN
Ordered Locus Names:b1310, JW1303
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13911 ycjN

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_000003171320 – 430Putative ABC transporter periplasmic-binding protein YcjNAdd BLAST411

Proteomic databases

PaxDbiP76042
PRIDEiP76042

Interactioni

Protein-protein interaction databases

BioGridi4263229, 49 interactors
DIPiDIP-11605N
IntActiP76042, 1 interactor
STRINGi316385.ECDH10B_1427

Structurei

3D structure databases

ProteinModelPortaliP76042
SMRiP76042
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105WEM Bacteria
COG1653 LUCA
HOGENOMiHOG000089522
InParanoidiP76042
KOiK02027
OMAiWGGEMFG
PhylomeDBiP76042

Family and domain databases

InterProiView protein in InterPro
IPR006059 SBP
PfamiView protein in Pfam
PF01547 SBP_bac_1, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P76042-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKSKIVLLS ALVSCALISG CKEENKTNVS IEFMHSSVEQ ERQAVISKLI
60 70 80 90 100
ARFEKENPGI TVKQVPVEED AYNTKVITLS RSGSLPEVIE TSHDYAKVMD
110 120 130 140 150
KEQLIDRKAV ATVISNVGEG AFYDGVLRIV RTEDGSAWTG VPVSAWIGGI
160 170 180 190 200
WYRKDVLAKA GLEEPKNWQQ LLDVAQKLND PANKKYGIAL PTAESVLTEQ
210 220 230 240 250
SFSQFALSNQ ANVFNAEGKI TLDTPEMMQA LTYYRDLTAN TMPGSNDIME
260 270 280 290 300
VKDAFMNGTA PMAIYSTYIL PAVIKEGDPK NVGFVVPTEK NSAVYGMLTS
310 320 330 340 350
LTITAGQKTE ETEAAEKFVT FMEQADNIAD WVMMSPGAAL PVNKAVVTTA
360 370 380 390 400
TWKDNDVIKA LGELPNQLIG ELPNIQVFGA VGDKNFTRMG DVTGSGVVSS
410 420 430
MVHNVTVGKA DLSTTLQASQ KKLDELIEQH
Length:430
Mass (Da):46,808
Last modified:February 1, 1997 - v1
Checksum:iA0CC1409F7227482
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74392.1
AP009048 Genomic DNA Translation: BAE76398.1
PIRiA64880
RefSeqiNP_415826.1, NC_000913.3
WP_000597466.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74392; AAC74392; b1310
BAE76398; BAE76398; BAE76398
GeneIDi945696
KEGGiecj:JW1303
eco:b1310
PATRICifig|1411691.4.peg.969

Similar proteinsi

Entry informationi

Entry nameiYCJN_ECOLI
AccessioniPrimary (citable) accession number: P76042
Secondary accession number(s): Q2MBF8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health