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Protein

Putrescine importer PuuP

Gene

puuP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Involved in the uptake of putrescine.2 Publications

Kineticsi

  1. KM=3.7 µM for putrescine1 Publication
  1. Vmax=19.9 nmol/min/mg enzyme1 Publication

Pathwayi: putrescine degradation

This protein is involved in the pathway putrescine degradation, which is part of Amine and polyamine degradation.
View all proteins of this organism that are known to be involved in the pathway putrescine degradation and in Amine and polyamine degradation.

GO - Molecular functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki
  • L-alpha-amino acid transmembrane transport Source: GOC
  • L-amino acid transport Source: GOC
  • proton transport Source: GOC
  • putrescine catabolic process Source: EcoCyc
  • putrescine transport Source: EcoCyc
Complete GO annotation...

Keywords - Biological processi

Amino-acid transport, Transport

Enzyme and pathway databases

BioCyciEcoCyc:B1296-MONOMER.
ECOL316407:JW1289-MONOMER.
MetaCyc:B1296-MONOMER.
UniPathwayiUPA00188.

Protein family/group databases

TCDBi2.A.3.1.13. the amino acid-polyamine-organocation (apc) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Putrescine importer PuuP
Gene namesi
Name:puuP
Synonyms:ycjJ
Ordered Locus Names:b1296, JW1289
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13907. puuP.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei27 – 4721HelicalSequence analysisAdd
BLAST
Transmembranei54 – 7421HelicalSequence analysisAdd
BLAST
Transmembranei100 – 12021HelicalSequence analysisAdd
BLAST
Transmembranei125 – 14521HelicalSequence analysisAdd
BLAST
Transmembranei162 – 18221HelicalSequence analysisAdd
BLAST
Transmembranei204 – 22421HelicalSequence analysisAdd
BLAST
Transmembranei242 – 26221HelicalSequence analysisAdd
BLAST
Transmembranei275 – 29521HelicalSequence analysisAdd
BLAST
Transmembranei344 – 36421HelicalSequence analysisAdd
BLAST
Transmembranei365 – 38521HelicalSequence analysisAdd
BLAST
Transmembranei399 – 41921HelicalSequence analysisAdd
BLAST
Transmembranei422 – 44221HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Mutagenesisi110 – 1101Y → X: The uptake activity is reduced to one-eighth of that of wild-type. 1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 461461Putrescine importer PuuPPRO_0000054211Add
BLAST

Proteomic databases

PaxDbiP76037.

Expressioni

Inductioni

Repressed by PuuR.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4260139. 3 interactions.
DIPiDIP-11601N.
IntActiP76037. 2 interactions.
MINTiMINT-1252906.
STRINGi511145.b1296.

Structurei

3D structure databases

ProteinModelPortaliP76037.
SMRiP76037. Positions 20-380.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105CUB. Bacteria.
COG0531. LUCA.
HOGENOMiHOG000164060.
InParanoidiP76037.
KOiK14052.
OMAiCGAACIG.
OrthoDBiEOG6716MJ.
PhylomeDBiP76037.

Family and domain databases

InterProiIPR004841. AA-permease/SLC12A_dom.
IPR002293. AA/rel_permease1.
[Graphical view]
PANTHERiPTHR11785. PTHR11785. 1 hit.
PfamiPF00324. AA_permease. 1 hit.
[Graphical view]
PIRSFiPIRSF006060. AA_transporter. 1 hit.

Sequencei

Sequence statusi: Complete.

P76037-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAINSPLNIA AQPGKTRLRK SLKLWQVVMM GLAYLTPMTV FDTFGIVSGI
60 70 80 90 100
SDGHVPASYL LALAGVLFTA ISYGKLVRQF PEAGSAYTYA QKSINPHVGF
110 120 130 140 150
MVGWSSLLDY LFLPMINVLL AKIYLSALFP EVPPWVWVVT FVAILTAANL
160 170 180 190 200
KSVNLVANFN TLFVLVQISI MVVFIFLVVQ GLHKGEGVGT VWSLQPFISE
210 220 230 240 250
NAHLIPIITG ATIVCFSFLG FDAVTTLSEE TPDAARVIPK AIFLTAVYGG
260 270 280 290 300
VIFIAASFFM QLFFPDISRF KDPDAALPEI ALYVGGKLFQ SIFLCTTFVN
310 320 330 340 350
TLASGLASHA SVSRLLYVMG RDNVFPERVF GYVHPKWRTP ALNVIMVGIV
360 370 380 390 400
ALSALFFDLV TATALINFGA LVAFTFVNLS VFNHFWRRKG MNKSWKDHFH
410 420 430 440 450
YLLMPLVGAL TVGVLWVNLE STSLTLGLVW ASLGGAYLWY LIRRYRKVPL
460
YDGDRTPVSE T
Length:461
Mass (Da):50,853
Last modified:December 15, 1998 - v2
Checksum:iB027F1FA01C1B5BB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74378.2.
AP009048 Genomic DNA. Translation: BAA14856.2.
PIRiC64878.
RefSeqiNP_415812.4. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC74378; AAC74378; b1296.
BAA14856; BAA14856; BAA14856.
GeneIDi946287.
KEGGiecj:JW1289.
eco:b1296.
PATRICi32117862. VBIEscCol129921_1351.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74378.2.
AP009048 Genomic DNA. Translation: BAA14856.2.
PIRiC64878.
RefSeqiNP_415812.4. NC_000913.3.

3D structure databases

ProteinModelPortaliP76037.
SMRiP76037. Positions 20-380.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260139. 3 interactions.
DIPiDIP-11601N.
IntActiP76037. 2 interactions.
MINTiMINT-1252906.
STRINGi511145.b1296.

Protein family/group databases

TCDBi2.A.3.1.13. the amino acid-polyamine-organocation (apc) family.

Proteomic databases

PaxDbiP76037.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74378; AAC74378; b1296.
BAA14856; BAA14856; BAA14856.
GeneIDi946287.
KEGGiecj:JW1289.
eco:b1296.
PATRICi32117862. VBIEscCol129921_1351.

Organism-specific databases

EchoBASEiEB3666.
EcoGeneiEG13907. puuP.

Phylogenomic databases

eggNOGiENOG4105CUB. Bacteria.
COG0531. LUCA.
HOGENOMiHOG000164060.
InParanoidiP76037.
KOiK14052.
OMAiCGAACIG.
OrthoDBiEOG6716MJ.
PhylomeDBiP76037.

Enzyme and pathway databases

UniPathwayiUPA00188.
BioCyciEcoCyc:B1296-MONOMER.
ECOL316407:JW1289-MONOMER.
MetaCyc:B1296-MONOMER.

Miscellaneous databases

PROiP76037.

Family and domain databases

InterProiIPR004841. AA-permease/SLC12A_dom.
IPR002293. AA/rel_permease1.
[Graphical view]
PANTHERiPTHR11785. PTHR11785. 1 hit.
PfamiPF00324. AA_permease. 1 hit.
[Graphical view]
PIRSFiPIRSF006060. AA_transporter. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], SEQUENCE REVISION.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12."
    Kurihara S., Oda S., Kato K., Kim H.G., Koyanagi T., Kumagai H., Suzuki H.
    J. Biol. Chem. 280:4602-4608(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION AS A PUTRESCINE IMPORTER, NOMENCLATURE.
    Strain: K12.
  5. "The putrescine Importer PuuP of Escherichia coli K-12."
    Kurihara S., Tsuboi Y., Oda S., Kim H.G., Kumagai H., Suzuki H.
    J. Bacteriol. 191:2776-2782(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION IN PUTRESCINE DEGRADATION AND AS A PUTRESCINE IMPORTER, MUTAGENESIS OF TYR-110, INDUCTION, BIOPHYSICOCHEMICAL PROPERTIES.
    Strain: K12.

Entry informationi

Entry nameiPUUP_ECOLI
AccessioniPrimary (citable) accession number: P76037
Secondary accession number(s): P77557
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: December 15, 1998
Last modified: February 17, 2016
This is version 131 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.