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P76017 (YCGV_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 95. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized protein YcgV
Gene names
Name:ycgV
Ordered Locus Names:b1202, JW1193
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length955 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 autotransporter (TC 1.B.12) domain. [View classification]

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcell adhesion involved in biofilm formation

Inferred from mutant phenotype PubMed 15659678. Source: EcoCyc

   Cellular_componentouter membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 955955Uncharacterized protein YcgV
PRO_0000204729

Regions

Domain687 – 955269Autotransporter

Sequences

Sequence LengthMass (Da)Tools
P76017 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 5EDD67B15EA1D9AF

FASTA95599,685
        10         20         30         40         50         60 
MGIKQHNGNT KADRLAELKI RSPSIQLIKF GAIGLNAIIF SPLLIAADTG SQYGTNITIN 

        70         80         90        100        110        120 
DGDRITGDTA DPSGNLYGVM TPAGNTPGNI NLGNDVTVNV NDASGYAKGI IIQGKNSSLT 

       130        140        150        160        170        180 
ANRLTVDVVG QTSAIGINLI GDYTHADLGT GSTIKSNDDG IIIGHSSTLT ATQFTIENSN 

       190        200        210        220        230        240 
GIGLTINDYG TSVDLGSGSK ITTDGSTGVY IGGLNGNNAN GAARFTATDL TIDVQGYSAM 

       250        260        270        280        290        300 
GINVQKNSVV DLGTNSTIKT NGDNAHGLWS FGQVSANALT VDVTGAAANG VEVRGGTTTI 

       310        320        330        340        350        360 
GADSHISSAQ GGGLVTSGSD AIINFTGTAA QRNSIFSGGS YGASAQTATA VVNMQNTDIT 

       370        380        390        400        410        420 
VDRNGSLALG LWALSGGRIT GDSLAITGAA GARGIYAMTN SQIDLTSDLV IDMSTPDQMA 

       430        440        450        460        470        480 
IATQHDDGYA ASRINASGRM LINGSVLSKG GLINLDMHPG SVWTGSSLSD NVNGGKLDVA 

       490        500        510        520        530        540 
MNNSVWNVTS NSNLDTLALS HSTVDFASHG STAGTFATLN VENLSGNSTF IMRADVVGEG 

       550        560        570        580        590        600 
NGVNNKGDLL NISGSSAGNH VLAIRNQGSE ATTGNEVLTV VKTTDGAASF SASSQVELGG 

       610        620        630        640        650        660 
YLYDVRKNGT NWELYASGTV PEPTPNPEPT PAPAQPPIVN PDPTPEPAPT PKPTTTADAG 

       670        680        690        700        710        720 
GNYLNVGYLL NYVENRTLMQ RMGDLRNQSK DGNIWLRSYG GSLDSFASGK LSGFDMGYSG 

       730        740        750        760        770        780 
IQFGGDKRLS DVMPLYVGLY IGSTHASPDY SGGDGTARSD YMGMYASYMA QNGFYSDLVI 

       790        800        810        820        830        840 
KASRQKNSFH VLDSQNNGVN ANGTANGMSI SLEAGQRFNL SPTGYGFYIE PQTQLTYSHQ 

       850        860        870        880        890        900 
NEMTMKASNG LNIHLNHYES LLGRASMILG YDITAGNSQL NVYVKTGAIR EFSGDTEYLL 

       910        920        930        940        950 
NNSREKYSFK GNGWNNGVGV SAQYNKQHTF YLEADYTQGN LFDQKQVNGG YRFSF

« Hide

References

[1]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map."
Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K., Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S., Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K. expand/collapse author list , Mori H., Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G., Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M., Horiuchi T.
DNA Res. 3:137-155(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 1-71 AND 194-955.
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U00096 Genomic DNA. Translation: AAC74286.1.
AP009048 Genomic DNA. Translation: BAA36059.2.
PIRG64866.
RefSeqNP_415720.1. NC_000913.2.
YP_489469.1. NC_007779.1.

3D structure databases

ProteinModelPortalP76017.
SMRP76017. Positions 669-955.
ModBaseSearch...

Protein-protein interaction databases

IntActP76017. 2 interactions.
STRING511145.b1202.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC74286; AAC74286; b1202.
BAA36059; BAA36059; BAA36059.
GeneID12931903.
945767.
KEGGecj:Y75_p1174.
eco:b1202.
PATRIC32117654. VBIEscCol129921_1249.

Organism-specific databases

EchoBASEEB3662.
EcoGeneEG13903. ycgV.

Phylogenomic databases

eggNOGCOG3468.
HOGENOMHOG000009435.
OMAYASYMAH.
ProtClustDBCLSK880001.

Enzyme and pathway databases

BioCycEcoCyc:G6629-MONOMER.
ECOL316407:JW1193-MONOMER.

Gene expression databases

GenevestigatorP76017.

Family and domain databases

Gene3D2.160.20.20. 1 hit.
InterProIPR005546. Auto_transptbeta.
IPR006315. OM_autotransptr_brl.
IPR012332. P22_tailspike_C-like.
IPR011050. Pectin_lyase_fold/virulence.
IPR004899. Pertactin_central.
IPR003991. Pertactin_virulence_factor.
[Graphical view]
PfamPF03797. Autotransporter. 1 hit.
PF03212. Pertactin. 1 hit.
[Graphical view]
PRINTSPR01484. PRTACTNFAMLY.
SMARTSM00869. Autotransporter. 1 hit.
[Graphical view]
SUPFAMSSF103515. Auto_transptbeta. 1 hit.
SSF51126. Pectin_lyas_like. 1 hit.
TIGRFAMsTIGR01414. autotrans_barl. 1 hit.
PROSITEPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYCGV_ECOLI
AccessionPrimary (citable) accession number: P76017
Secondary accession number(s): Q9R7N1, Q9R7N2
Entry history
Integrated into UniProtKB/Swiss-Prot: April 16, 2002
Last sequence update: February 1, 1997
Last modified: May 1, 2013
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene

SIMILARITY comments

Index of protein domains and families

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