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Protein

Uncharacterized protein YcgV

Gene

ycgV

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

  • cell adhesion involved in biofilm formation Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G6629-MONOMER

Protein family/group databases

TCDBi1.B.12.2.6 the autotransporter-1 (at-1) family

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YcgV
Gene namesi
Name:ycgV
Ordered Locus Names:b1202, JW1193
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13903 ycgV

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002047291 – 955Uncharacterized protein YcgVAdd BLAST955

Proteomic databases

PaxDbiP76017
PRIDEiP76017

Interactioni

Protein-protein interaction databases

BioGridi4260897, 218 interactors
IntActiP76017, 2 interactors
STRINGi316385.ECDH10B_1255

Structurei

3D structure databases

ProteinModelPortaliP76017
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini687 – 955AutotransporterPROSITE-ProRule annotationAdd BLAST269

Phylogenomic databases

eggNOGiENOG4105I1J Bacteria
COG3468 LUCA
HOGENOMiHOG000009435
OMAiNFEAGRF
PhylomeDBiP76017

Family and domain databases

InterProiView protein in InterPro
IPR005546 Autotransporte_beta
IPR036709 Autotransporte_beta_dom_sf
IPR006315 OM_autotransptr_brl
IPR011050 Pectin_lyase_fold/virulence
IPR004899 Pertactin_central
IPR003991 Pertactin_virulence_factor
PfamiView protein in Pfam
PF03797 Autotransporter, 1 hit
PF03212 Pertactin, 1 hit
PRINTSiPR01484 PRTACTNFAMLY
SMARTiView protein in SMART
SM00869 Autotransporter, 1 hit
SUPFAMiSSF103515 SSF103515, 1 hit
SSF51126 SSF51126, 1 hit
TIGRFAMsiTIGR01414 autotrans_barl, 1 hit
PROSITEiView protein in PROSITE
PS51208 AUTOTRANSPORTER, 1 hit

Sequencei

Sequence statusi: Complete.

P76017-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIKQHNGNT KADRLAELKI RSPSIQLIKF GAIGLNAIIF SPLLIAADTG
60 70 80 90 100
SQYGTNITIN DGDRITGDTA DPSGNLYGVM TPAGNTPGNI NLGNDVTVNV
110 120 130 140 150
NDASGYAKGI IIQGKNSSLT ANRLTVDVVG QTSAIGINLI GDYTHADLGT
160 170 180 190 200
GSTIKSNDDG IIIGHSSTLT ATQFTIENSN GIGLTINDYG TSVDLGSGSK
210 220 230 240 250
ITTDGSTGVY IGGLNGNNAN GAARFTATDL TIDVQGYSAM GINVQKNSVV
260 270 280 290 300
DLGTNSTIKT NGDNAHGLWS FGQVSANALT VDVTGAAANG VEVRGGTTTI
310 320 330 340 350
GADSHISSAQ GGGLVTSGSD AIINFTGTAA QRNSIFSGGS YGASAQTATA
360 370 380 390 400
VVNMQNTDIT VDRNGSLALG LWALSGGRIT GDSLAITGAA GARGIYAMTN
410 420 430 440 450
SQIDLTSDLV IDMSTPDQMA IATQHDDGYA ASRINASGRM LINGSVLSKG
460 470 480 490 500
GLINLDMHPG SVWTGSSLSD NVNGGKLDVA MNNSVWNVTS NSNLDTLALS
510 520 530 540 550
HSTVDFASHG STAGTFATLN VENLSGNSTF IMRADVVGEG NGVNNKGDLL
560 570 580 590 600
NISGSSAGNH VLAIRNQGSE ATTGNEVLTV VKTTDGAASF SASSQVELGG
610 620 630 640 650
YLYDVRKNGT NWELYASGTV PEPTPNPEPT PAPAQPPIVN PDPTPEPAPT
660 670 680 690 700
PKPTTTADAG GNYLNVGYLL NYVENRTLMQ RMGDLRNQSK DGNIWLRSYG
710 720 730 740 750
GSLDSFASGK LSGFDMGYSG IQFGGDKRLS DVMPLYVGLY IGSTHASPDY
760 770 780 790 800
SGGDGTARSD YMGMYASYMA QNGFYSDLVI KASRQKNSFH VLDSQNNGVN
810 820 830 840 850
ANGTANGMSI SLEAGQRFNL SPTGYGFYIE PQTQLTYSHQ NEMTMKASNG
860 870 880 890 900
LNIHLNHYES LLGRASMILG YDITAGNSQL NVYVKTGAIR EFSGDTEYLL
910 920 930 940 950
NNSREKYSFK GNGWNNGVGV SAQYNKQHTF YLEADYTQGN LFDQKQVNGG

YRFSF
Length:955
Mass (Da):99,685
Last modified:February 1, 1997 - v1
Checksum:i5EDD67B15EA1D9AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74286.1
AP009048 Genomic DNA Translation: BAA36059.2
PIRiG64866
RefSeqiNP_415720.1, NC_000913.3
WP_001334788.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74286; AAC74286; b1202
BAA36059; BAA36059; BAA36059
GeneIDi945767
KEGGiecj:JW1193
eco:b1202
PATRICifig|1411691.4.peg.1083

Similar proteinsi

Entry informationi

Entry nameiYCGV_ECOLI
AccessioniPrimary (citable) accession number: P76017
Secondary accession number(s): Q9R7N1, Q9R7N2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 16, 2002
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health