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Protein

UPF0410 protein YmgE

Gene

ymgE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6624-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0410 protein YmgE
Alternative name(s):
Transglycosylase-associated gene protein
Gene namesi
Name:ymgE
Synonyms:tag
Ordered Locus Names:b1195, JW1184
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14338. ymgE.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei1 – 21HelicalSequence analysisAdd BLAST21
Transmembranei27 – 47HelicalSequence analysisAdd BLAST21
Transmembranei58 – 78HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000724201 – 84UPF0410 protein YmgEAdd BLAST84

Proteomic databases

PaxDbiP76011.
PRIDEiP76011.

Interactioni

Protein-protein interaction databases

BioGridi4262916. 114 interactors.
STRINGi316385.ECDH10B_1248.

Structurei

3D structure databases

ProteinModelPortaliP76011.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0410 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105Y3U. Bacteria.
COG2261. LUCA.
HOGENOMiHOG000281220.
InParanoidiP76011.
PhylomeDBiP76011.

Family and domain databases

InterProiView protein in InterPro
IPR007341. Transgly_assoc.
PfamiView protein in Pfam
PF04226. Transgly_assoc. 1 hit.

Sequencei

Sequence statusi: Complete.

P76011-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIIAWIIFD LIAGIIAKLI MPGRDGGGFF LTCILGIVGA VVGGWLATMF
60 70 80
GIGGSISGFN LHSFLVAVVG AILVLGIFRL LRRE
Length:84
Mass (Da):8,775
Last modified:July 11, 2001 - v3
Checksum:i78ED929220264E62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74279.1.
AP009048 Genomic DNA. Translation: BAA36053.1.
PIRiH64865.
RefSeqiNP_415713.1. NC_000913.3.
WP_001310727.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74279; AAC74279; b1195.
BAA36053; BAA36053; BAA36053.
GeneIDi945760.
KEGGiecj:JW1184.
eco:b1195.
PATRICifig|1411691.4.peg.1091.

Similar proteinsi

Entry informationi

Entry nameiYMGE_ECOLI
AccessioniPrimary (citable) accession number: P76011
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: July 11, 2001
Last modified: September 27, 2017
This is version 115 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries