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Protein

Uncharacterized protein YcgJ

Gene

ycgJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6614-MONOMER.
ECOL316407:JW1166-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YcgJ
Gene namesi
Name:ycgJ
Ordered Locus Names:b1177, JW1166
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13891. ycgJ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 122100Uncharacterized protein YcgJPRO_0000013827Add
BLAST

Proteomic databases

PaxDbiP76001.

Interactioni

Protein-protein interaction databases

BioGridi4262871. 13 interactions.
STRINGi511145.b1177.

Structurei

3D structure databases

ProteinModelPortaliP76001.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105S66. Bacteria.
ENOG4111XFY. LUCA.
HOGENOMiHOG000119735.
OMAiNGIFCDV.
OrthoDBiEOG68DD1S.

Family and domain databases

InterProiIPR008617. Uncharacterised_YcgJ.
[Graphical view]
PfamiPF05666. Fels1. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P76001-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNMMRIFYIG LSGVGMMFSS MASGNDAGGL QSPACGVVCD PYICVNSDGI
60 70 80 90 100
SPELTRKYLG EKAAENLQSL QGYDPSEFTF ANGVFCDVKE KLCRDDRYFG
110 120
VDGKRSGKIN QTTTKMLFMC RE
Length:122
Mass (Da):13,414
Last modified:February 1, 1997 - v1
Checksum:i5F9BFE7F637F20C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74261.1.
AP009048 Genomic DNA. Translation: BAA36011.1.
PIRiF64863.
RefSeqiNP_415695.1. NC_000913.3.
WP_001056840.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74261; AAC74261; b1177.
BAA36011; BAA36011; BAA36011.
GeneIDi946155.
KEGGiecj:JW1166.
eco:b1177.
PATRICi32117598. VBIEscCol129921_1221.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74261.1.
AP009048 Genomic DNA. Translation: BAA36011.1.
PIRiF64863.
RefSeqiNP_415695.1. NC_000913.3.
WP_001056840.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76001.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262871. 13 interactions.
STRINGi511145.b1177.

Proteomic databases

PaxDbiP76001.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74261; AAC74261; b1177.
BAA36011; BAA36011; BAA36011.
GeneIDi946155.
KEGGiecj:JW1166.
eco:b1177.
PATRICi32117598. VBIEscCol129921_1221.

Organism-specific databases

EchoBASEiEB3650.
EcoGeneiEG13891. ycgJ.

Phylogenomic databases

eggNOGiENOG4105S66. Bacteria.
ENOG4111XFY. LUCA.
HOGENOMiHOG000119735.
OMAiNGIFCDV.
OrthoDBiEOG68DD1S.

Enzyme and pathway databases

BioCyciEcoCyc:G6614-MONOMER.
ECOL316407:JW1166-MONOMER.

Miscellaneous databases

PROiP76001.

Family and domain databases

InterProiIPR008617. Uncharacterised_YcgJ.
[Graphical view]
PfamiPF05666. Fels1. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYCGJ_ECOLI
AccessioniPrimary (citable) accession number: P76001
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.