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Protein

Putative protein BeeE from lambdoid prophage e14 region

Gene

beeE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6595-MONOMER.
ECOL316407:JW1137-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative protein BeeE from lambdoid prophage e14 region
Gene namesi
Name:beeE
Synonyms:ymfO
Ordered Locus Names:b1151, JW1137
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14253. beeE.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 157157Putative protein BeeE from lambdoid prophage e14 regionPRO_0000168848Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi4262853. 9 interactions.
STRINGi316407.4062726.

Structurei

3D structure databases

ProteinModelPortaliP75980.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the phage portal family.Curated

Phylogenomic databases

eggNOGiENOG4105EFC. Bacteria.
COG4695. LUCA.
HOGENOMiHOG000202511.
OMAiKTMQTTA.

Family and domain databases

InterProiIPR006944. Phage/GTA_portal.
[Graphical view]
PfamiPF04860. Phage_portal. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P75980-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFFSGLFQRK SDAPVTTPAE LADAIGLSYD TYTGKQISSQ RAMRLTAVFS
60 70 80 90 100
CVRVLAESVG MLPCNLYHLN GSLKQRATGE RLHKLISTHP NGYMTPQEFW
110 120 130 140 150
ELVVTCLCLR GNFYAYKVKA FGEVAELLPV DPGCVVYALG RCQRWPEGDR

RECYSAR
Length:157
Mass (Da):17,609
Last modified:February 1, 1997 - v1
Checksum:i54CFD7BF609ECBA2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAA35977.1.
PIRiD64860.
RefSeqiWP_001350502.1. NZ_CP010440.1.

Genome annotation databases

EnsemblBacteriaiBAA35977; BAA35977; BAA35977.
KEGGiecj:JW1137.
PATRICi48661563. VBIEscCol107702_1150.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAA35977.1.
PIRiD64860.
RefSeqiWP_001350502.1. NZ_CP010440.1.

3D structure databases

ProteinModelPortaliP75980.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262853. 9 interactions.
STRINGi316407.4062726.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA35977; BAA35977; BAA35977.
KEGGiecj:JW1137.
PATRICi48661563. VBIEscCol107702_1150.

Organism-specific databases

EchoBASEiEB4001.
EcoGeneiEG14253. beeE.

Phylogenomic databases

eggNOGiENOG4105EFC. Bacteria.
COG4695. LUCA.
HOGENOMiHOG000202511.
OMAiKTMQTTA.

Enzyme and pathway databases

BioCyciEcoCyc:G6595-MONOMER.
ECOL316407:JW1137-MONOMER.

Family and domain databases

InterProiIPR006944. Phage/GTA_portal.
[Graphical view]
PfamiPF04860. Phage_portal. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiBEEE_ECOLI
AccessioniPrimary (citable) accession number: P75980
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.