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Protein

Uncharacterized protein YmfN

Gene

ymfN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6593-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YmfN
Gene namesi
Name:ymfN
Ordered Locus Names:b1149, JW1135
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14252. ymfN.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001688471 – 455Uncharacterized protein YmfNAdd BLAST455

Interactioni

Protein-protein interaction databases

BioGridi4261568. 6 interactors.
DIPiDIP-12724N.
IntActiP75978. 1 interactor.
MINTiMINT-1257432.
STRINGi316407.4062724.

Structurei

3D structure databases

ProteinModelPortaliP75978.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the phage terminase family.Curated

Phylogenomic databases

eggNOGiENOG4105CAR. Bacteria.
COG4626. LUCA.
HOGENOMiHOG000202510.
InParanoidiP75978.
PhylomeDBiP75978.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR005021. Terminase_largesu_Lambdalike.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF03354. Terminase_1. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.

Sequencei

Sequence statusi: Complete.

P75978-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTKLTGYVW DGCAASGMKL SSVAIMARLA DFSNDEGVCW PSIETIARQI
60 70 80 90 100
GAGMSTVRTA IARLEAEGWL TRKARRQGDG SSPHCAVVDE YHEHATDALY
110 120 130 140 150
TTMLTGMGAR RQPLMWAITT AGYNIEGPCY DKRREVIEML NGSVPNDELF
160 170 180 190 200
GIIYTVDEGD DWTDPQVLEK ANPNIGVSVY REFLLSQQQR AKNNARLANV
210 220 230 240 250
FKTKHLNIWA SARSAYFNLV SWQSCEDKSL TLEQFEGQPC ILAFDLARKL
260 270 280 290 300
DMNSMARLYT REIDGKTHYY SVAPRFWVPY DTVYSVEKNE DRRTAERFQK
310 320 330 340 350
WVEMGVLTVT DGAEVDYRYI LEEAKAANKI SPVSESPIDP FGATGLSHDL
360 370 380 390 400
ADEDLNPVTI IQNYTNMSDP MKELEAAIES GRFHHDGNPI MTWCIGNVVG
410 420 430 440 450
KTIPGNDDVV KPVKEQAENK IDGAVALIMA VGRAMLYEKE DTLSDHIESY

GIRSL
Length:455
Mass (Da):50,871
Last modified:February 1, 1997 - v1
Checksum:i4FA7FF2BEB90D6CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAA35975.1.
PIRiB64860.
RefSeqiWP_000104929.1. NZ_CP010440.1.

Genome annotation databases

EnsemblBacteriaiBAA35975; BAA35975; BAA35975.
KEGGiecj:JW1135.
PATRICifig|83333.103.peg.1937.

Similar proteinsi

Entry informationi

Entry nameiYMFN_ECOLI
AccessioniPrimary (citable) accession number: P75978
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: September 27, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families