P75970 (VXIS_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Excisionase-like protein from lambdoid prophage 14

Gene names

Name:	xisE
Synonyms:	vxis, ymfG
Ordered Locus Names:	b1141, JW1127

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	81 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

To lambdoid phages excisionases.

Ontologies

Keywords
Biological process	DNA recombination
Ligand	DNA-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 81	81	Excisionase-like protein from lambdoid prophage 14		PRO_0000077715

Sequences

	Sequence		Length	Mass (Da)
	P75970 [UniParc]. Last modified February 1, 1997. Version 1. Checksum: 7639E74912F08BE5	FASTA	81	9,287
	10 20 30 40 50 60 MLQMLTLEEW AAEKYRSNPP SVSTLRRYAK QNLFCPPAMK QGRLWRVRED AELVGELVTP 70 80 VIKKNDSLLL QRILSNGSQT A

References

[1]	"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map." Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K., Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S., Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K. , Mori H., Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G., Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M., Horiuchi T. DNA Res. 3:137-155(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[2]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[3]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00096 Genomic DNA. Translation: AAC74225.1. AP009048 Genomic DNA. Translation: BAA35970.1.
PIR	B64859.
RefSeq	NP_415659.1. NC_000913.2. YP_489409.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P75970.
SMR	P75970. Positions 4-55.
ModBase	Search...
Protein-protein interaction databases
IntAct	P75970. 25 interactions.
STRING	511145.b1141.
Proteomic databases
PRIDE	P75970.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC74225; AAC74225; b1141. BAA35970; BAA35970; BAA35970.
GeneID	12932349. 945705.
KEGG	ecj:Y75_p1111. eco:b1141.
Organism-specific databases
EchoBASE	EB3995.
EcoGene	EG14245. ymfG.
Phylogenomic databases
eggNOG	NOG289114.
HOGENOM	HOG000267948.
OMA	LEEWANE.
ProtClustDB	CLSK2393439.
Enzyme and pathway databases
BioCyc	EcoCyc:G6585-MONOMER. ECOL316407:JW1127-MONOMER.
Gene expression databases
Genevestigator	P75970.
Family and domain databases
Gene3D	1.10.1660.20. 1 hit.
InterPro	IPR009061. DNA-bd_dom_put. IPR012884. Excisionase-like. [Graphical view]
Pfam	PF07825. Exc. 1 hit. [Graphical view]
SUPFAM	SSF46955. Putativ_DNA_bind. 1 hit.
ProtoNet	Search...

Entry information

Entry name

VXIS_ECOLI

Accession

Primary (citable) accession number: P75970

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 27, 2001
Last sequence update:	February 1, 1997
Last modified:	May 1, 2013
This is version 83 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program