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P75970 (VXIS_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Excisionase-like protein from lambdoid prophage 14
Gene names
Name:xisE
Synonyms:vxis, ymfG
Ordered Locus Names:b1141, JW1127
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length81 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

To lambdoid phages excisionases.

Ontologies

Keywords
   Biological processDNA recombination
   LigandDNA-binding
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 8181Excisionase-like protein from lambdoid prophage 14
PRO_0000077715

Sequences

Sequence LengthMass (Da)Tools
P75970 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 7639E74912F08BE5

FASTA819,287
        10         20         30         40         50         60 
MLQMLTLEEW AAEKYRSNPP SVSTLRRYAK QNLFCPPAMK QGRLWRVRED AELVGELVTP 

        70         80 
VIKKNDSLLL QRILSNGSQT A 

« Hide

References

[1]"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map."
Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K., Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S., Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K. expand/collapse author list , Mori H., Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G., Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M., Horiuchi T.
DNA Res. 3:137-155(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00096 Genomic DNA. Translation: AAC74225.1.
AP009048 Genomic DNA. Translation: BAA35970.1.
PIRB64859.
RefSeqNP_415659.1. NC_000913.3.
YP_489409.1. NC_007779.1.

3D structure databases

ProteinModelPortalP75970.
SMRP75970. Positions 4-55.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP75970. 25 interactions.
STRING511145.b1141.

Proteomic databases

PRIDEP75970.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC74225; AAC74225; b1141.
BAA35970; BAA35970; BAA35970.
GeneID12932349.
945705.
KEGGecj:Y75_p1111.
eco:b1141.

Organism-specific databases

EchoBASEEB3995.
EcoGeneEG14245. ymfG.

Phylogenomic databases

eggNOGNOG289114.
HOGENOMHOG000267948.
OMAEEWANEK.
OrthoDBEOG6PP9RH.
ProtClustDBCLSK2393439.

Enzyme and pathway databases

BioCycEcoCyc:G6585-MONOMER.
ECOL316407:JW1127-MONOMER.

Gene expression databases

GenevestigatorP75970.

Family and domain databases

Gene3D1.10.1660.20. 1 hit.
InterProIPR009061. DNA-bd_dom_put.
IPR012884. Excisionase-like.
[Graphical view]
PfamPF07825. Exc. 1 hit.
[Graphical view]
SUPFAMSSF46955. SSF46955. 1 hit.
ProtoNetSearch...

Other

PROP75970.

Entry information

Entry nameVXIS_ECOLI
AccessionPrimary (citable) accession number: P75970
Entry history
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene