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Protein

Inner membrane protein YcfZ

Gene

ycfZ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6578-MONOMER.
ECOL316407:JW1107-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YcfZ
Gene namesi
Name:ycfZ
Ordered Locus Names:b1121, JW1107
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13444. ycfZ.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 4CytoplasmicSequence analysis4
Transmembranei5 – 27HelicalSequence analysisAdd BLAST23
Topological domaini28 – 182PeriplasmicSequence analysisAdd BLAST155
Transmembranei183 – 202HelicalSequence analysisAdd BLAST20
Topological domaini203 – 206CytoplasmicSequence analysis4
Transmembranei207 – 229HelicalSequence analysisAdd BLAST23
Topological domaini230 – 238PeriplasmicSequence analysis9
Transmembranei239 – 258HelicalSequence analysisAdd BLAST20
Topological domaini259 – 262CytoplasmicSequence analysis4

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001688391 – 262Inner membrane protein YcfZAdd BLAST262

Proteomic databases

PaxDbiP75961.
PRIDEiP75961.

Interactioni

Protein-protein interaction databases

DIPiDIP-11549N.
IntActiP75961. 1 interactor.
STRINGi511145.b1121.

Structurei

3D structure databases

ProteinModelPortaliP75961.
SMRiP75961.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000119096.
OMAiFRQNGKA.

Family and domain databases

InterProiIPR007621. TPM_dom.
[Graphical view]
PfamiPF04536. TPM_phosphatase. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P75961-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKFIILLSL LILLPLTAAS KPLIPIMKTL FTDVTGTVPD AEEIAHKAEL
60 70 80 90 100
FRQQTGIAPF IVVLPDINNE ASLRQNGKAM LAHASSSLSD VKGSVLLLFT
110 120 130 140 150
TREPRLIMIT NGQVESGLDD KHLGLLIENH TLAYLNADLW YQGINNALAV
160 170 180 190 200
LQAQILKQST PPLTYYPHPG QQHENAPPGS TNTLGFIAWA ATFILFSRIF
210 220 230 240 250
YYTTRFIYAL KFAVAMTIAN MGYQALCLYI DNSFAITRIS PLWAGLIGVC
260
TFIAALLLTS KR
Length:262
Mass (Da):28,865
Last modified:February 1, 1997 - v1
Checksum:iDED18267A493E969
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74205.1.
AP009048 Genomic DNA. Translation: BAA35941.1.
PIRiF64856.
RefSeqiNP_415639.1. NC_000913.3.
WP_000713462.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74205; AAC74205; b1121.
BAA35941; BAA35941; BAA35941.
GeneIDi945685.
KEGGiecj:JW1107.
eco:b1121.
PATRICi32117489. VBIEscCol129921_1167.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74205.1.
AP009048 Genomic DNA. Translation: BAA35941.1.
PIRiF64856.
RefSeqiNP_415639.1. NC_000913.3.
WP_000713462.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75961.
SMRiP75961.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-11549N.
IntActiP75961. 1 interactor.
STRINGi511145.b1121.

Proteomic databases

PaxDbiP75961.
PRIDEiP75961.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74205; AAC74205; b1121.
BAA35941; BAA35941; BAA35941.
GeneIDi945685.
KEGGiecj:JW1107.
eco:b1121.
PATRICi32117489. VBIEscCol129921_1167.

Organism-specific databases

EchoBASEiEB3218.
EcoGeneiEG13444. ycfZ.

Phylogenomic databases

HOGENOMiHOG000119096.
OMAiFRQNGKA.

Enzyme and pathway databases

BioCyciEcoCyc:G6578-MONOMER.
ECOL316407:JW1107-MONOMER.

Miscellaneous databases

PROiP75961.

Family and domain databases

InterProiIPR007621. TPM_dom.
[Graphical view]
PfamiPF04536. TPM_phosphatase. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYCFZ_ECOLI
AccessioniPrimary (citable) accession number: P75961
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.