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Protein

Inner membrane protein YcfT

Gene

ycfT

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6572-MONOMER.
ECOL316407:JW1101-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YcfT
Gene namesi
Name:ycfT
Ordered Locus Names:b1115, JW1101
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13438. ycfT.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 12CytoplasmicSequence analysisAdd BLAST12
Transmembranei13 – 33HelicalSequence analysisAdd BLAST21
Topological domaini34 – 49PeriplasmicSequence analysisAdd BLAST16
Transmembranei50 – 70HelicalSequence analysisAdd BLAST21
Topological domaini71 – 86CytoplasmicSequence analysisAdd BLAST16
Transmembranei87 – 107HelicalSequence analysisAdd BLAST21
Topological domaini108 – 135PeriplasmicSequence analysisAdd BLAST28
Transmembranei136 – 156HelicalSequence analysisAdd BLAST21
Topological domaini157 – 162CytoplasmicSequence analysis6
Transmembranei163 – 183HelicalSequence analysisAdd BLAST21
Topological domaini184 – 196PeriplasmicSequence analysisAdd BLAST13
Transmembranei197 – 217HelicalSequence analysisAdd BLAST21
Topological domaini218 – 231CytoplasmicSequence analysisAdd BLAST14
Transmembranei232 – 252HelicalSequence analysisAdd BLAST21
Topological domaini253 – 310PeriplasmicSequence analysisAdd BLAST58
Transmembranei311 – 331HelicalSequence analysisAdd BLAST21
Topological domaini332 – 357CytoplasmicSequence analysisAdd BLAST26

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002080971 – 357Inner membrane protein YcfTAdd BLAST357

Proteomic databases

PaxDbiP75955.
PRIDEiP75955.

Interactioni

Protein-protein interaction databases

BioGridi4260087. 117 interactors.
STRINGi511145.b1115.

Structurei

3D structure databases

ProteinModelPortaliP75955.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the acyltransferase 3 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105IQC. Bacteria.
COG4763. LUCA.
HOGENOMiHOG000119085.
InParanoidiP75955.
OMAiKRIWSIF.

Family and domain databases

InterProiIPR002656. Acyl_transf_3.
[Graphical view]
PfamiPF01757. Acyl_transf_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P75955-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQKELWINQ IKGLCICLVV IYHSVITFYP HLTTFQHPLS EVLSKCWIYF
60 70 80 90 100
NLYLAPFRMP VFFFISGYLI RRYIDSVPWG NCLDKRIWNI FWVLALWGVV
110 120 130 140 150
QWLALSALNQ WLAPERDLSN ASNAAYADST GEFLHGMITA STSLWYLYAL
160 170 180 190 200
IVYFVVCKIF SRLALPLFAL FVLLSVAVNF VPTPWWGMNS VIRNLPYYSL
210 220 230 240 250
GAWFGATIMT CVKEVPLRRH LLMASLLTVL AVGAWLFTIS LLLSLVSIVV
260 270 280 290 300
IMKLFYQYEQ RFGMRSTSLL NVIGSNTIAI YTTHRILVEI FSLTLLAQMN
310 320 330 340 350
AARWSPQVEL TLLLVYPFVS LFICTVAGLL VRKLSQRAFS DLLFSPPSLP

AAVSYSR
Length:357
Mass (Da):40,834
Last modified:February 1, 1997 - v1
Checksum:iF1ED5FBC7781A4F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74199.1.
AP009048 Genomic DNA. Translation: BAA35930.1.
PIRiH64855.
RefSeqiNP_415633.1. NC_000913.3.
WP_000810253.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74199; AAC74199; b1115.
BAA35930; BAA35930; BAA35930.
GeneIDi945679.
KEGGiecj:JW1101.
eco:b1115.
PATRICi32117473. VBIEscCol129921_1159.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74199.1.
AP009048 Genomic DNA. Translation: BAA35930.1.
PIRiH64855.
RefSeqiNP_415633.1. NC_000913.3.
WP_000810253.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75955.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260087. 117 interactors.
STRINGi511145.b1115.

Proteomic databases

PaxDbiP75955.
PRIDEiP75955.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74199; AAC74199; b1115.
BAA35930; BAA35930; BAA35930.
GeneIDi945679.
KEGGiecj:JW1101.
eco:b1115.
PATRICi32117473. VBIEscCol129921_1159.

Organism-specific databases

EchoBASEiEB3212.
EcoGeneiEG13438. ycfT.

Phylogenomic databases

eggNOGiENOG4105IQC. Bacteria.
COG4763. LUCA.
HOGENOMiHOG000119085.
InParanoidiP75955.
OMAiKRIWSIF.

Enzyme and pathway databases

BioCyciEcoCyc:G6572-MONOMER.
ECOL316407:JW1101-MONOMER.

Miscellaneous databases

PROiP75955.

Family and domain databases

InterProiIPR002656. Acyl_transf_3.
[Graphical view]
PfamiPF01757. Acyl_transf_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYCFT_ECOLI
AccessioniPrimary (citable) accession number: P75955
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.