Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Inner membrane protein YcdZ

Gene

ycdZ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6542-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YcdZ
Gene namesi
Name:ycdZ
Ordered Locus Names:b1036, JW5147
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13872 ycdZ

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 2CytoplasmicSequence analysis2
Transmembranei3 – 23HelicalSequence analysisAdd BLAST21
Topological domaini24PeriplasmicSequence analysis1
Transmembranei25 – 45HelicalSequence analysisAdd BLAST21
Topological domaini46 – 48CytoplasmicSequence analysis3
Transmembranei49 – 69HelicalSequence analysisAdd BLAST21
Topological domaini70 – 71PeriplasmicSequence analysis2
Transmembranei72 – 92HelicalSequence analysisAdd BLAST21
Topological domaini93 – 98CytoplasmicSequence analysis6
Transmembranei99 – 119HelicalSequence analysisAdd BLAST21
Topological domaini120 – 122PeriplasmicSequence analysis3
Transmembranei123 – 143HelicalSequence analysisAdd BLAST21
Topological domaini144 – 163CytoplasmicSequence analysisAdd BLAST20

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001688081 – 163Inner membrane protein YcdZAdd BLAST163

Proteomic databases

PaxDbiP75916
PRIDEiP75916

Interactioni

Protein-protein interaction databases

BioGridi4260063, 15 interactors
STRINGi316385.ECDH10B_1108

Structurei

3D structure databases

ProteinModelPortaliP75916
SMRiP75916
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YahC.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108UQ5 Bacteria
ENOG4111GJZ LUCA
HOGENOMiHOG000284435
OMAiWGWVAIS

Family and domain databases

InterProiView protein in InterPro
IPR009476 DUF1097
PfamiView protein in Pfam
PF06496 DUF1097, 1 hit

Sequencei

Sequence statusi: Complete.

P75916-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNILLSIAIT TGILSGIWGW VAVSLGLLSW AGFLGCTAYF ACPQGGLKGL
60 70 80 90 100
AISAATLLSG VVWAMVIIYG SALAPHLEIL GYVITGIVAF LMCIQAKQLL
110 120 130 140 150
LSFVPGTFIG ACATFAGQGD WKLVLPSLAL GLIFGYAMKN SGLWLAARSA
160
KTAHREQEIK NKA
Length:163
Mass (Da):17,074
Last modified:April 27, 2001 - v2
Checksum:i999BE93A1FE35B68
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74120.2
AP009048 Genomic DNA Translation: BAA35817.2
PIRiA64846
RefSeqiNP_415554.4, NC_000913.3
WP_001300785.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74120; AAC74120; b1036
BAA35817; BAA35817; BAA35817
GeneIDi945617
KEGGiecj:JW5147
eco:b1036
PATRICifig|511145.12.peg.1075

Similar proteinsi

Entry informationi

Entry nameiYCDZ_ECOLI
AccessioniPrimary (citable) accession number: P75916
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: April 27, 2001
Last modified: March 28, 2018
This is version 110 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health