Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized lipoprotein GfcB

Gene

gfcB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Caution

In E.coli K12 / MG1655 and K12 / W3110 this operon is silenced by an IS1D insertion in the promoter region.Curated

Enzyme and pathway databases

BioCyciEcoCyc:G6507-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein GfcB
Alternative name(s):
Group 4 capsule protein B homolog
Gene namesi
Name:gfcB
Synonyms:ymcC
Ordered Locus Names:b0986, JW0969
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13731 gfcB

Subcellular locationi

  • Cell membrane PROSITE-ProRule annotation; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 15PROSITE-ProRule annotationAdd BLAST15
ChainiPRO_000001805516 – 214Uncharacterized lipoprotein GfcBAdd BLAST199

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi16N-palmitoyl cysteinePROSITE-ProRule annotation1
Lipidationi16S-diacylglycerol cysteinePROSITE-ProRule annotation1

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiP75884
PRIDEiP75884

Interactioni

Protein-protein interaction databases

DIPiDIP-12709N
IntActiP75884, 1 interactor
STRINGi316385.ECDH10B_1056

Structurei

Secondary structure

1214
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi23 – 33Combined sources11
Helixi41 – 46Combined sources6
Beta strandi51 – 56Combined sources6
Beta strandi62 – 70Combined sources9
Beta strandi73 – 77Combined sources5
Beta strandi83 – 87Combined sources5
Beta strandi90 – 99Combined sources10
Beta strandi101 – 106Combined sources6
Helixi107 – 109Combined sources3
Helixi111 – 117Combined sources7
Beta strandi123 – 132Combined sources10
Beta strandi135 – 155Combined sources21
Beta strandi158 – 171Combined sources14
Turni172 – 175Combined sources4
Beta strandi176 – 185Combined sources10
Turni186 – 188Combined sources3
Beta strandi191 – 201Combined sources11
Beta strandi203 – 209Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2IN5X-ray2.30A/B17-214[»]
ProteinModelPortaliP75884
SMRiP75884
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP75884

Family & Domainsi

Sequence similaritiesi

To E.coli YjbF.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108Y9B Bacteria
ENOG4111IXI LUCA
HOGENOMiHOG000280367
OMAiPANAGIP

Family and domain databases

Gene3Di2.40.360.10, 1 hit
InterProiView protein in InterPro
IPR021308 GfcB
IPR023373 YmcC_sf
PfamiView protein in Pfam
PF11102 YjbF, 1 hit
SUPFAMiSSF159270 SSF159270, 1 hit
PROSITEiView protein in PROSITE
PS51257 PROKAR_LIPOPROTEIN, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P75884-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPLILSIFA LFLAGCTHSQ QSMVDTFRAS LFDNQDITVA DQQIQALPYS
60 70 80 90 100
TMYLRLNEGQ RIFVVLGYIE QEQSKWLSQD NAMLVTHNGR LLKTVKLNNN
110 120 130 140 150
LLEVTNSGQD PLRNALAIKD GSRWTRDILW SEDNHFRSAT LSSTFSFAGL
160 170 180 190 200
ETLNIAGRNV LCNVWQEEVT STRPEKQWQN TFWVDSATGQ VRQSRQMLGA
210
GVIPVEMTFL KPAP
Length:214
Mass (Da):24,268
Last modified:February 1, 1997 - v1
Checksum:i77A3111CBAF3E90D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74071.1
AP009048 Genomic DNA Translation: BAA35751.1
PIRiH64839
RefSeqiNP_415506.1, NC_000913.3
WP_001247610.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74071; AAC74071; b0986
BAA35751; BAA35751; BAA35751
GeneIDi949118
KEGGiecj:JW0969
eco:b0986
PATRICifig|1411691.4.peg.1287

Similar proteinsi

Entry informationi

Entry nameiGFCB_ECOLI
AccessioniPrimary (citable) accession number: P75884
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health