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Protein

Uncharacterized protein GfcC

Gene

gfcC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6506-MONOMER.
ECOL316407:JW0968-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein GfcC
Alternative name(s):
Group 4 capsule protein C homolog
Gene namesi
Name:gfcC
Synonyms:ymcB
Ordered Locus Names:b0985, JW0968
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13730. gfcC.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_000001381623 – 248Uncharacterized protein GfcCAdd BLAST226

Proteomic databases

PaxDbiP75883.
PRIDEiP75883.

Interactioni

Protein-protein interaction databases

BioGridi4261410. 21 interactors.
DIPiDIP-12708N.
IntActiP75883. 5 interactors.
MINTiMINT-1302737.
STRINGi511145.b0985.

Structurei

3D structure databases

ProteinModelPortaliP75883.
SMRiP75883.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YjbG.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108W78. Bacteria.
ENOG4111IU0. LUCA.
HOGENOMiHOG000126863.
OMAiWWPGTAI.

Family and domain databases

InterProiIPR010425. DUF1017.
[Graphical view]
PfamiPF06251. Caps_synth_GfcC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P75883-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKLQSYFIA SVLYVMTPHA FAQGTVTIYL PGEQQTLSVG PVENVVQLVT
60 70 80 90 100
QPQLRDRLWW PGALLTDSAA KAKALKDYQH VMAQLASWEA EADDDVAATI
110 120 130 140 150
KSVRQQLLNL NITGRLPVKL DPDFVRVDEN SNPPLVGDYT LYTVQRPVTI
160 170 180 190 200
TLLGAVSGAG QLPWQAGRSV TDYLQDHPRL AGADKNNVMV ITPEGETVVA
210 220 230 240
PVALWNKRHV EPPPGSQLWL GFSAHVLPEK YADLNDQIVS VLTQRVPD
Length:248
Mass (Da):27,296
Last modified:February 1, 1997 - v1
Checksum:i74F5B38825C4587B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74070.1.
AP009048 Genomic DNA. Translation: BAA35750.2.
PIRiG64839.
RefSeqiNP_415505.1. NC_000913.3.
WP_001038079.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74070; AAC74070; b0985.
BAA35750; BAA35750; BAA35750.
GeneIDi944978.
KEGGiecj:JW0968.
eco:b0985.
PATRICi32117193. VBIEscCol129921_1020.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74070.1.
AP009048 Genomic DNA. Translation: BAA35750.2.
PIRiG64839.
RefSeqiNP_415505.1. NC_000913.3.
WP_001038079.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75883.
SMRiP75883.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261410. 21 interactors.
DIPiDIP-12708N.
IntActiP75883. 5 interactors.
MINTiMINT-1302737.
STRINGi511145.b0985.

Proteomic databases

PaxDbiP75883.
PRIDEiP75883.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74070; AAC74070; b0985.
BAA35750; BAA35750; BAA35750.
GeneIDi944978.
KEGGiecj:JW0968.
eco:b0985.
PATRICi32117193. VBIEscCol129921_1020.

Organism-specific databases

EchoBASEiEB3494.
EcoGeneiEG13730. gfcC.

Phylogenomic databases

eggNOGiENOG4108W78. Bacteria.
ENOG4111IU0. LUCA.
HOGENOMiHOG000126863.
OMAiWWPGTAI.

Enzyme and pathway databases

BioCyciEcoCyc:G6506-MONOMER.
ECOL316407:JW0968-MONOMER.

Miscellaneous databases

PROiP75883.

Family and domain databases

InterProiIPR010425. DUF1017.
[Graphical view]
PfamiPF06251. Caps_synth_GfcC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiGFCC_ECOLI
AccessioniPrimary (citable) accession number: P75883
Secondary accession number(s): Q9Z3A3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

In E.coli K12 / MG1655 and K12 / W3110 this operon is silenced by an IS1D insertion in the promoter region.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.