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Protein

Uncharacterized lipoprotein GfcD

Gene

gfcD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

In E.coli K12 / MG1655 and K12 / W3110 this operon is silenced by an IS1D insertion in the promoter region.Curated

Enzyme and pathway databases

BioCyciEcoCyc:G6505-MONOMER

Protein family/group databases

TCDBi1.B.14.16.11 the outer membrane receptor (omr) family

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein GfcD
Alternative name(s):
Group 4 capsule protein D homolog
Gene namesi
Name:gfcD
Synonyms:ymcA
Ordered Locus Names:b0984, JW0967
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13729 gfcD

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18PROSITE-ProRule annotationAdd BLAST18
ChainiPRO_000001805719 – 698Uncharacterized lipoprotein GfcDAdd BLAST680

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi19N-palmitoyl cysteinePROSITE-ProRule annotation1
Lipidationi19S-diacylglycerol cysteinePROSITE-ProRule annotation1

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiP75882
PRIDEiP75882

Interactioni

Protein-protein interaction databases

BioGridi4261409, 175 interactors
DIPiDIP-12707N
IntActiP75882, 10 interactors
STRINGi316385.ECDH10B_1054

Structurei

3D structure databases

ProteinModelPortaliP75882
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105E3R Bacteria
ENOG410XQV2 LUCA
HOGENOMiHOG000280356
OMAiWARYASE

Family and domain databases

InterProiView protein in InterPro
IPR010344 YbjH
PfamiView protein in Pfam
PF06082 YjbH, 1 hit
PROSITEiView protein in PROSITE
PS51257 PROKAR_LIPOPROTEIN, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P75882-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKNSYLLSC LAIAVSSACH AEVLTYPDPL GSSQSDFGGT GLLQMPNARI
60 70 80 90 100
APEGEFSVNY RDNDQYRFYS TSVALFPWLE GTIRYTDVRT RKYSQWEDFS
110 120 130 140 150
GDQSYKDKSF DFKLRLWEEG YWLPQVAFGK RDIAGTGLFD GEYLVASKQA
160 170 180 190 200
GPFDFTLGMA WGYAGNAGNI TNPFCRVSDK YCHRAESHDA GDISFSDIFR
210 220 230 240 250
GPASIFGGIE YQTPWNPLRL KLEYDGNNYQ NDFAGKLPQA SHFNVGAVYR
260 270 280 290 300
AASWADLNLS YERGNTLMFG FTLRTNFNDL RPALRDTPKP AYQPAPESEG
310 320 330 340 350
LQYTTVANQL TALKYNAGFD APEIQLRDKT LYMSGQQYKY RDSREAVDRA
360 370 380 390 400
NRILVNNLPQ GVEKISVTQK REHMAMVTTE TDVASLRKQL AGTAPGQSEP
410 420 430 440 450
LQQQRVEAED LSAFGRGYRI REDRFSYSFN PTLSQSLGGP EDFYMFQLGL
460 470 480 490 500
MSSARYWFTD HLLLDGGIFT NIYNNYDKFK SSLLPADSTL PRVRTHIRDY
510 520 530 540 550
VRNDVYLNNL QANYFADLGN GFYGQVYGGY LETMYAGVGS ELLYRPLDAC
560 570 580 590 600
WALGVDVNYV KQRDWDNMMR FTDYSTPTGF VTAYWNPPTL NGVLMKLSVG
610 620 630 640 650
QYLAKDKGAT IDVAKRFDSG VAVGVWAAIS NVSKDDYGEG GFSKGFYISI
660 670 680 690
PFDLMTIGPN RNRAVVSWTP LTRDGGQMLS RKYQLYPMTA EREVPVGQ
Length:698
Mass (Da):78,687
Last modified:February 1, 1997 - v1
Checksum:i37F71D2DC57FA4E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74069.1
AP009048 Genomic DNA Translation: BAA35749.1
PIRiF64839
RefSeqiNP_415504.1, NC_000913.3
WP_000742328.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74069; AAC74069; b0984
BAA35749; BAA35749; BAA35749
GeneIDi945588
KEGGiecj:JW0967
eco:b0984
PATRICifig|511145.12.peg.1019

Similar proteinsi

Entry informationi

Entry nameiGFCD_ECOLI
AccessioniPrimary (citable) accession number: P75882
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health