Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YcbX

Gene

ycbX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • response to toxic substance Source: EcoCyc
  • toxin catabolic process Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G6487-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YcbX
Gene namesi
Name:ycbX
Ordered Locus Names:b0947, JW5126
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13716. ycbX.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002013111 – 369Uncharacterized protein YcbXAdd BLAST369

Proteomic databases

PaxDbiP75863.
PRIDEiP75863.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
cysJP380384EBI-544422,EBI-544440

Protein-protein interaction databases

BioGridi4260024. 897 interactors.
DIPiDIP-28068N.
IntActiP75863. 3 interactors.
STRINGi316385.ECDH10B_1017.

Structurei

3D structure databases

ProteinModelPortaliP75863.
SMRiP75863.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini115 – 264MOSCPROSITE-ProRule annotationAdd BLAST150
Domaini289 – 3692Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd BLAST81

Phylogenomic databases

eggNOGiENOG4105QVC. Bacteria.
COG0633. LUCA.
COG3217. LUCA.
HOGENOMiHOG000180195.
InParanoidiP75863.
KOiK07140.
PhylomeDBiP75863.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiView protein in InterPro
IPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR005302. MoCF_Sase_C.
IPR005303. MOSC_N.
IPR011037. Pyrv_Knase-like_insert_dom.
PfamiView protein in Pfam
PF00111. Fer2. 1 hit.
PF03473. MOSC. 1 hit.
PF03476. MOSC_N. 1 hit.
SUPFAMiSSF50800. SSF50800. 2 hits.
SSF54292. SSF54292. 1 hit.
PROSITEiView protein in PROSITE
PS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
PS51340. MOSC. 1 hit.

Sequencei

Sequence statusi: Complete.

P75863-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATLIRLFIH PVKSMRGIGL THALADVSGL AFDRIFMITE PDGTFITARQ
60 70 80 90 100
FPQMVRFTPS PVHDGLHLTA PDGSSAYVRF ADFATQDAPT EVWGTHFTAR
110 120 130 140 150
IAPDAINKWL SGFFSREVQL RWVGPQMTRR VKRHNTVPLS FADGYPYLLA
160 170 180 190 200
NEASLRDLQQ RCPASVKMEQ FRPNLVVSGA SAWEEDRWKV IRIGDVVFDV
210 220 230 240 250
VKPCSRCIFT TVSPEKGQKH PAGEPLKTLQ SFRTAQDNGD VDFGQNLIAR
260 270 280 290 300
NSGVIRVGDE VEILATAPAK IYGAAAADDT ANITQQPDAN VDIDWQGQAF
310 320 330 340 350
RGNNQQVLLE QLENQGIRIP YSCRAGICGS CRVQLLEGEV TPLKKSAMGD
360
DGTILCCSCV PKTALKLAR
Length:369
Mass (Da):40,644
Last modified:February 1, 1997 - v1
Checksum:i43C8F2BCC25018AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74033.1.
AP009048 Genomic DNA. Translation: BAA35702.2.
PIRiB64835.
RefSeqiNP_415467.1. NC_000913.3.
WP_000212426.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74033; AAC74033; b0947.
BAA35702; BAA35702; BAA35702.
GeneIDi945563.
KEGGiecj:JW5126.
eco:b0947.
PATRICifig|1411691.4.peg.1327.

Similar proteinsi

Entry informationi

Entry nameiYCBX_ECOLI
AccessioniPrimary (citable) accession number: P75863
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: February 1, 1997
Last modified: August 30, 2017
This is version 130 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene