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Protein

Uncharacterized fimbrial-like protein YcbV

Gene

ycbV

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces.1 Publication

Miscellaneous

The operon is cryptic under classical laboratory conditions, but is functional when constitutively expressed.1 Publication

GO - Biological processi

  • cell adhesion involved in single-species biofilm formation Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G6485-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized fimbrial-like protein YcbV
Gene namesi
Name:ycbV
Ordered Locus Names:b0943, JW5123
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13714 ycbV

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_000001376618 – 171Uncharacterized fimbrial-like protein YcbVAdd BLAST154

Proteomic databases

PaxDbiP75860
PRIDEiP75860

Expressioni

Inductioni

Expression is negatively regulated by H-NS and subjected to cAMP receptor protein (CRP)-mediated catabolite repression.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi425944214 interactors.
DIPiDIP-48182N
STRINGi316385.ECDH10B_1013

Structurei

3D structure databases

ProteinModelPortaliP75860
SMRiP75860
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105MX3 Bacteria
COG3539 LUCA
HOGENOMiHOG000260127
InParanoidiP75860
OMAiITAKTCI
PhylomeDBiP75860

Family and domain databases

Gene3Di2.60.40.10901 hit
InterProiView protein in InterPro
IPR000259 Adhesion_dom_fimbrial
IPR036937 Adhesion_dom_fimbrial_sf
IPR008966 Adhesion_dom_sf
PfamiView protein in Pfam
PF00419 Fimbrial, 1 hit
SUPFAMiSSF49401 SSF49401, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P75860-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKRIIWILF LLGLTWGCEL FAHDGTVNIS GSFRRNTCVL AQDSKQINVQ
60 70 80 90 100
LGDVSLTRFS HGNYGPEKSF IINLQDCGTD VSTVDVTFSG TPDGVQSEML
110 120 130 140 150
SIESGTDAAS GLAIAILDDA KILIPLNQAS KDYSLHSGKV PLTFYAQLRP
160 170
VNSDVQSGKV NASATFVLHY D
Length:171
Mass (Da):18,512
Last modified:March 27, 2002 - v2
Checksum:i8E1CAF6A0ABE5FA1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74029.2
AP009048 Genomic DNA Translation: BAA35698.2
PIRiF64834
RefSeqiNP_415463.2, NC_000913.3
WP_000919497.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74029; AAC74029; b0943
BAA35698; BAA35698; BAA35698
GeneIDi945562
KEGGiecj:JW5123
eco:b0943
PATRICifig|511145.12.peg.977

Similar proteinsi

Entry informationi

Entry nameiYCBV_ECOLI
AccessioniPrimary (citable) accession number: P75860
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: March 27, 2002
Last modified: March 28, 2018
This is version 111 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome