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Protein

Putative aliphatic sulfonates-binding protein

Gene

ssuA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein.

GO - Biological processi

  • sulfur compound metabolic process Source: EcoliWiki
  • transport Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciEcoCyc:G6478-MONOMER.
ECOL316407:JW0919-MONOMER.
MetaCyc:G6478-MONOMER.

Protein family/group databases

TCDBi3.A.1.17.10. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative aliphatic sulfonates-binding protein
Gene namesi
Name:ssuA
Synonyms:ycbO
Ordered Locus Names:b0936, JW0919
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13707. ssuA.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 319298Putative aliphatic sulfonates-binding proteinPRO_0000031864Add
BLAST

Proteomic databases

PaxDbiP75853.
PRIDEiP75853.

Interactioni

Protein-protein interaction databases

BioGridi4260023. 6 interactions.
STRINGi511145.b0936.

Structurei

Secondary structure

1
319
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi27 – 337Combined sources
Helixi38 – 458Combined sources
Helixi48 – 525Combined sources
Beta strandi56 – 627Combined sources
Helixi66 – 7510Combined sources
Beta strandi79 – 835Combined sources
Helixi86 – 938Combined sources
Beta strandi98 – 1047Combined sources
Helixi108 – 1103Combined sources
Beta strandi111 – 1166Combined sources
Helixi124 – 1274Combined sources
Beta strandi130 – 1345Combined sources
Helixi139 – 15012Combined sources
Helixi155 – 1573Combined sources
Beta strandi158 – 1625Combined sources
Helixi165 – 1739Combined sources
Beta strandi176 – 1838Combined sources
Helixi186 – 1938Combined sources
Beta strandi194 – 2029Combined sources
Beta strandi210 – 2156Combined sources
Helixi216 – 2216Combined sources
Helixi223 – 24220Combined sources
Helixi244 – 25512Combined sources
Helixi259 – 2679Combined sources
Helixi279 – 29416Combined sources
Beta strandi297 – 3004Combined sources
Helixi304 – 3074Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2X26X-ray1.75A/B25-319[»]
ProteinModelPortaliP75853.
SMRiP75853. Positions 25-319.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP75853.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105GVF. Bacteria.
ENOG410XQHT. LUCA.
HOGENOMiHOG000164730.
InParanoidiP75853.
KOiK15553.
OMAiKISWIEF.
OrthoDBiEOG6RC3MJ.
PhylomeDBiP75853.

Family and domain databases

InterProiIPR010067. ABC_SsuA_sub-bd.
IPR001638. Solute-binding_3/MltF_N.
IPR015168. SsuA/THI5.
[Graphical view]
PfamiPF09084. NMT1. 1 hit.
[Graphical view]
SMARTiSM00062. PBPb. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01728. SsuA_fam. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P75853-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNIIKLALA GLLSVSTFAV AAESSPEALR IGYQKGSIGM VLAKSHQLLE
60 70 80 90 100
KRYPESKISW VEFPAGPQML EALNVGSIDL GSTGDIPPIF AQAAGADLVY
110 120 130 140 150
VGVEPPKPKA EVILVAENSP IKTVADLKGH KVAFQKGSSS HNLLLRALRQ
160 170 180 190 200
AGLKFTDIQP TYLTPADARA AFQQGNVDAW AIWDPYYSAA LLQGGVRVLK
210 220 230 240 250
DGTDLNQTGS FYLAARPYAE KNGAFIQGVL ATFSEADALT RSQREQSIAL
260 270 280 290 300
LAKTMGLPAP VIASYLDHRP PTTIKPVNAE VAALQQQTAD LFYENRLVPK
310
KVDIRQRIWQ PTQLEGKQL
Length:319
Mass (Da):34,558
Last modified:December 15, 1998 - v2
Checksum:iB4CB0711F38D53D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ237695 Genomic DNA. Translation: CAB40390.1.
U00096 Genomic DNA. Translation: AAC74022.2.
AP009048 Genomic DNA. Translation: BAA35691.2.
PIRiG64833.
RefSeqiNP_415456.4. NC_000913.3.
WP_001244308.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74022; AAC74022; b0936.
BAA35691; BAA35691; BAA35691.
GeneIDi945560.
KEGGiecj:JW0919.
eco:b0936.
PATRICi32117091. VBIEscCol129921_0970.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ237695 Genomic DNA. Translation: CAB40390.1.
U00096 Genomic DNA. Translation: AAC74022.2.
AP009048 Genomic DNA. Translation: BAA35691.2.
PIRiG64833.
RefSeqiNP_415456.4. NC_000913.3.
WP_001244308.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2X26X-ray1.75A/B25-319[»]
ProteinModelPortaliP75853.
SMRiP75853. Positions 25-319.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260023. 6 interactions.
STRINGi511145.b0936.

Protein family/group databases

TCDBi3.A.1.17.10. the atp-binding cassette (abc) superfamily.

Proteomic databases

PaxDbiP75853.
PRIDEiP75853.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74022; AAC74022; b0936.
BAA35691; BAA35691; BAA35691.
GeneIDi945560.
KEGGiecj:JW0919.
eco:b0936.
PATRICi32117091. VBIEscCol129921_0970.

Organism-specific databases

EchoBASEiEB3471.
EcoGeneiEG13707. ssuA.

Phylogenomic databases

eggNOGiENOG4105GVF. Bacteria.
ENOG410XQHT. LUCA.
HOGENOMiHOG000164730.
InParanoidiP75853.
KOiK15553.
OMAiKISWIEF.
OrthoDBiEOG6RC3MJ.
PhylomeDBiP75853.

Enzyme and pathway databases

BioCyciEcoCyc:G6478-MONOMER.
ECOL316407:JW0919-MONOMER.
MetaCyc:G6478-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP75853.
PROiP75853.

Family and domain databases

InterProiIPR010067. ABC_SsuA_sub-bd.
IPR001638. Solute-binding_3/MltF_N.
IPR015168. SsuA/THI5.
[Graphical view]
PfamiPF09084. NMT1. 1 hit.
[Graphical view]
SMARTiSM00062. PBPb. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01728. SsuA_fam. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The Escherichia coli ssuEADCB gene cluster is required for the utilization of sulfur from aliphatic sulfonates and is regulated by the transcriptional activator Cbl."
    Van der Ploeg J.R., Iwanicka-Nowicka R., Bykowski T., Hryniewicz M.M., Leisinger T.
    J. Biol. Chem. 274:29358-29365(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiSSUA_ECOLI
AccessioniPrimary (citable) accession number: P75853
Secondary accession number(s): Q9R7Q5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: December 15, 1998
Last modified: January 20, 2016
This is version 115 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.