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Protein

Putative aliphatic sulfonates transport permease protein SsuC

Gene

ssuC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane.

GO - Biological processi

  • sulfur compound metabolic process Source: EcoliWiki
  • transmembrane transport Source: InterPro

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:YCBM-MONOMER
MetaCyc:YCBM-MONOMER

Protein family/group databases

TCDBi3.A.1.17.10 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
Putative aliphatic sulfonates transport permease protein SsuC
Gene namesi
Name:ssuC
Synonyms:ycbM
Ordered Locus Names:b0934, JW5121
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13705 ssuC

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 13CytoplasmicSequence analysisAdd BLAST13
Transmembranei14 – 34HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini35 – 43PeriplasmicSequence analysis9
Transmembranei44 – 64HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini65 – 68CytoplasmicSequence analysis4
Transmembranei69 – 89HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini90 – 102PeriplasmicSequence analysisAdd BLAST13
Transmembranei103 – 122HelicalPROSITE-ProRule annotationAdd BLAST20
Topological domaini123 – 125CytoplasmicSequence analysis3
Transmembranei126 – 148HelicalPROSITE-ProRule annotationAdd BLAST23
Topological domaini149 – 164PeriplasmicSequence analysisAdd BLAST16
Transmembranei165 – 185HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini186 – 187CytoplasmicSequence analysis2
Transmembranei188 – 208HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini209 – 217PeriplasmicSequence analysis9
Transmembranei218 – 238HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini239 – 263CytoplasmicSequence analysisAdd BLAST25

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000602281 – 263Putative aliphatic sulfonates transport permease protein SsuCAdd BLAST263

Proteomic databases

PaxDbiP75851
PRIDEiP75851

Interactioni

Protein-protein interaction databases

BioGridi4260017, 16 interactors
STRINGi316385.ECDH10B_1004

Structurei

3D structure databases

ProteinModelPortaliP75851
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini58 – 242ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST185

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105EFS Bacteria
COG0600 LUCA
HOGENOMiHOG000134230
InParanoidiP75851
KOiK15554
OMAiLRWHPGY
PhylomeDBiP75851

Family and domain databases

CDDicd06261 TM_PBP2, 1 hit
Gene3Di1.10.3720.10, 1 hit
InterProiView protein in InterPro
IPR000515 MetI-like
IPR035906 MetI-like_sf
PfamiView protein in Pfam
PF00528 BPD_transp_1, 1 hit
SUPFAMiSSF161098 SSF161098, 1 hit
PROSITEiView protein in PROSITE
PS50928 ABC_TM1, 1 hit

Sequencei

Sequence statusi: Complete.

P75851-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATPVKKWLL RVAPWFLPVG IVAVWQLASS VGWLSTRILP SPEGVVTAFW
60 70 80 90 100
TLSASGELWQ HLAISSWRAL IGFSIGGSLG LILGLISGLS RWGERLLDTS
110 120 130 140 150
IQMLRNVPHL ALIPLVILWF GIDESAKIFL VALGTLFPIY INTWHGIRNI
160 170 180 190 200
DRGLVEMARS YGLSGIPLFI HVILPGALPS IMVGVRFALG LMWLTLIVAE
210 220 230 240 250
TISANSGIGY LAMNAREFLQ TDVVVVAIIL YALLGKLADV SAQLLERLWL
260
RWNPAYHLKE ATV
Length:263
Mass (Da):28,925
Last modified:December 15, 1998 - v2
Checksum:iDF84985E95116FA2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ237695 Genomic DNA Translation: CAB40392.1
U00096 Genomic DNA Translation: AAC74020.2
AP009048 Genomic DNA Translation: BAA35689.2
PIRiE64833
RefSeqiNP_415454.4, NC_000913.3
WP_000235203.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74020; AAC74020; b0934
BAA35689; BAA35689; BAA35689
GeneIDi947216
KEGGiecj:JW5121
eco:b0934
PATRICifig|1411691.4.peg.1340

Similar proteinsi

Entry informationi

Entry nameiSSUC_ECOLI
AccessioniPrimary (citable) accession number: P75851
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: December 15, 1998
Last modified: March 28, 2018
This is version 129 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health