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Protein

Inner membrane protein YbjJ

Gene

ybjJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6443-MONOMER.
ECOL316407:JW0829-MONOMER.

Protein family/group databases

TCDBi2.A.1.60.2. the major facilitator superfamily (mfs).

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YbjJ
Gene namesi
Name:ybjJ
Ordered Locus Names:b0845, JW0829
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13679. ybjJ.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 1111CytoplasmicSequence analysisAdd
BLAST
Transmembranei12 – 3423HelicalSequence analysisAdd
BLAST
Topological domaini35 – 4814PeriplasmicSequence analysisAdd
BLAST
Transmembranei49 – 7123HelicalSequence analysisAdd
BLAST
Topological domaini72 – 776CytoplasmicSequence analysis
Transmembranei78 – 10023HelicalSequence analysisAdd
BLAST
Topological domaini101 – 1033PeriplasmicSequence analysis
Transmembranei104 – 12623HelicalSequence analysisAdd
BLAST
Topological domaini127 – 13812CytoplasmicSequence analysisAdd
BLAST
Transmembranei139 – 16123HelicalSequence analysisAdd
BLAST
Topological domaini162 – 1643PeriplasmicSequence analysis
Transmembranei165 – 18723HelicalSequence analysisAdd
BLAST
Topological domaini188 – 20720CytoplasmicSequence analysisAdd
BLAST
Transmembranei208 – 23023HelicalSequence analysisAdd
BLAST
Topological domaini231 – 25222PeriplasmicSequence analysisAdd
BLAST
Transmembranei253 – 27523HelicalSequence analysisAdd
BLAST
Topological domaini276 – 2816CytoplasmicSequence analysis
Transmembranei282 – 30120HelicalSequence analysisAdd
BLAST
Topological domaini302 – 3043PeriplasmicSequence analysis
Transmembranei305 – 32723HelicalSequence analysisAdd
BLAST
Topological domaini328 – 33912CytoplasmicSequence analysisAdd
BLAST
Transmembranei340 – 36223HelicalSequence analysisAdd
BLAST
Topological domaini363 – 3664PeriplasmicSequence analysis
Transmembranei367 – 38923HelicalSequence analysisAdd
BLAST
Topological domaini390 – 40213CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of plasma membrane Source: GO_Central
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 402402Inner membrane protein YbjJPRO_0000201309Add
BLAST

Proteomic databases

PaxDbiP75810.
PRIDEiP75810.

Interactioni

Protein-protein interaction databases

BioGridi4262831. 128 interactions.
STRINGi511145.b0845.

Structurei

3D structure databases

ProteinModelPortaliP75810.
SMRiP75810. Positions 51-91, 337-367.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4106UW1. Bacteria.
ENOG410XRK1. LUCA.
HOGENOMiHOG000249005.
InParanoidiP75810.
OMAiCHAIAFA.
PhylomeDBiP75810.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P75810-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVNSSRNAL KRRTWALFMF FFLPGLLMAS WATRTPAIRD ILSVSIAEMG
60 70 80 90 100
GVLFGLSIGS MSGILCSAWL VKRFGTRNVI LVTMSCALIG MMILSLALWL
110 120 130 140 150
TSPLLFAVGL GVFGASFGSA EVAINVEGAA VEREMNKTVL PMMHGFYSLG
160 170 180 190 200
TLAGAGVGMA LTAFGVPATV HILLAALVGI APIYIAIQAI PDGTGKNAAD
210 220 230 240 250
GTQHGEKGVP FYRDIQLLLI GVVVLAMAFA EGSANDWLPL LMVDGHGFSP
260 270 280 290 300
TSGSLIYAGF TLGMTVGRFT GGWFIDRYSR VAVVRASALM GALGIGLIIF
310 320 330 340 350
VDSAWVAGVS VVLWGLGASL GFPLTISAAS DTGPDAPTRV SVVATTGYLA
360 370 380 390 400
FLVGPPLLGY LGEHYGLRSA MLVVLALVIL AAIVAKAVAK PDTKTQTAME

NS
Length:402
Mass (Da):41,852
Last modified:February 1, 1997 - v1
Checksum:iCAD8B3F3B150D622
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73932.1.
AP009048 Genomic DNA. Translation: BAA35549.1.
PIRiE64822.
RefSeqiNP_415366.1. NC_000913.3.
WP_000217859.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73932; AAC73932; b0845.
BAA35549; BAA35549; BAA35549.
GeneIDi945471.
KEGGiecj:JW0829.
eco:b0845.
PATRICi32116895. VBIEscCol129921_0873.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73932.1.
AP009048 Genomic DNA. Translation: BAA35549.1.
PIRiE64822.
RefSeqiNP_415366.1. NC_000913.3.
WP_000217859.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75810.
SMRiP75810. Positions 51-91, 337-367.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262831. 128 interactions.
STRINGi511145.b0845.

Protein family/group databases

TCDBi2.A.1.60.2. the major facilitator superfamily (mfs).

Proteomic databases

PaxDbiP75810.
PRIDEiP75810.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73932; AAC73932; b0845.
BAA35549; BAA35549; BAA35549.
GeneIDi945471.
KEGGiecj:JW0829.
eco:b0845.
PATRICi32116895. VBIEscCol129921_0873.

Organism-specific databases

EchoBASEiEB3443.
EcoGeneiEG13679. ybjJ.

Phylogenomic databases

eggNOGiENOG4106UW1. Bacteria.
ENOG410XRK1. LUCA.
HOGENOMiHOG000249005.
InParanoidiP75810.
OMAiCHAIAFA.
PhylomeDBiP75810.

Enzyme and pathway databases

BioCyciEcoCyc:G6443-MONOMER.
ECOL316407:JW0829-MONOMER.

Miscellaneous databases

PROiP75810.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBJJ_ECOLI
AccessioniPrimary (citable) accession number: P75810
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.