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Protein

Putative lipoprotein YliF

Gene

yliF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6434-MONOMER.
ECOL316407:JW0818-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative lipoprotein YliF
Gene namesi
Name:yliF
Ordered Locus Names:b0834, JW0818
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13477. yliF.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei231 – 25121HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323PROSITE-ProRule annotationAdd
BLAST
Chaini24 – 442419Putative lipoprotein YliFPRO_0000168730Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi24 – 241N-palmitoyl cysteinePROSITE-ProRule annotation
Lipidationi24 – 241S-diacylglycerol cysteinePROSITE-ProRule annotation

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiP75801.
PRIDEiP75801.

Interactioni

Protein-protein interaction databases

BioGridi4261104. 15 interactions.
STRINGi511145.b0834.

Structurei

3D structure databases

ProteinModelPortaliP75801.
SMRiP75801. Positions 264-439.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini319 – 442124GGDEFPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 GGDEF domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG41064RH. Bacteria.
COG2199. LUCA.
HOGENOMiHOG000118183.
OMAiEKGSYLC.
PhylomeDBiP75801.

Family and domain databases

CDDicd01949. GGDEF. 1 hit.
InterProiIPR033422. GAPES2.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF17156. GAPES2. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
PS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P75801-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRINKFVLT VSLLIFIMIS AVACGIYTQM VKERVYSLKQ SVIDTAFAVA
60 70 80 90 100
NIAEYRRSVA IDLINTLNPT EEQLLVGLRT AYADSVSPSY LYDVGPYLIS
110 120 130 140 150
SDECIQVKEF EKNYCADIMQ VVKYRHVKNT GFISFDGKTF VYYLYPVTHN
160 170 180 190 200
RSLIFLLGLE RFSLLSKSLA MDSENLMFSL FKNGKPVTGD EYNAKNAIFT
210 220 230 240 250
VSEAMEHFAY LPTGLYVFAY KKDVYLRVCT LIIFFAALVA VISGASCLYL
260 270 280 290 300
VRRVINRGIV EKEAIINNHF ERVLDGGLFF SAADVKKLYS MYNSAFLDDL
310 320 330 340 350
TKAMGRKSFD EDLKALPEKG GYLCLFDVDK FKNINDTFGH LLGDEVLMKV
360 370 380 390 400
VKILKSQIPV DKGKVYRFGG DEFAVIYTGG TLEELLSILK EIVHFQVGSI
410 420 430 440
NLSTSIGVAH SNECPTVERL KMLADERLYK SKKNGRAQIS WQ
Length:442
Mass (Da):49,873
Last modified:February 1, 1997 - v1
Checksum:i52244FBA2E0CF643
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73921.1.
AP009048 Genomic DNA. Translation: BAA35529.1.
PIRiB64821.
RefSeqiNP_415355.1. NC_000913.3.
WP_000086904.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73921; AAC73921; b0834.
BAA35529; BAA35529; BAA35529.
GeneIDi945463.
KEGGiecj:JW0818.
eco:b0834.
PATRICi32116871. VBIEscCol129921_0861.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73921.1.
AP009048 Genomic DNA. Translation: BAA35529.1.
PIRiB64821.
RefSeqiNP_415355.1. NC_000913.3.
WP_000086904.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75801.
SMRiP75801. Positions 264-439.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261104. 15 interactions.
STRINGi511145.b0834.

Proteomic databases

PaxDbiP75801.
PRIDEiP75801.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73921; AAC73921; b0834.
BAA35529; BAA35529; BAA35529.
GeneIDi945463.
KEGGiecj:JW0818.
eco:b0834.
PATRICi32116871. VBIEscCol129921_0861.

Organism-specific databases

EchoBASEiEB3250.
EcoGeneiEG13477. yliF.

Phylogenomic databases

eggNOGiENOG41064RH. Bacteria.
COG2199. LUCA.
HOGENOMiHOG000118183.
OMAiEKGSYLC.
PhylomeDBiP75801.

Enzyme and pathway databases

BioCyciEcoCyc:G6434-MONOMER.
ECOL316407:JW0818-MONOMER.

Miscellaneous databases

PROiP75801.

Family and domain databases

CDDicd01949. GGDEF. 1 hit.
InterProiIPR033422. GAPES2.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF17156. GAPES2. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
PS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYLIF_ECOLI
AccessioniPrimary (citable) accession number: P75801
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 118 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.