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Protein

Uncharacterized protein YbhJ

Gene

ybhJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

[4Fe-4S] clusterBy similarityNote: Binds 1 [4Fe-4S] cluster per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi360Iron-sulfur (4Fe-4S)By similarity1
Metal bindingi421Iron-sulfur (4Fe-4S)By similarity1
Metal bindingi424Iron-sulfur (4Fe-4S)By similarity1

GO - Molecular functioni

GO - Biological processi

  • metabolic process Source: InterPro
  • response to oxidative stress Source: EcoCyc
Complete GO annotation...

Keywords - Ligandi

Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyciEcoCyc:G6401-MONOMER.
ECOL316407:JW5103-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbhJ
Gene namesi
Name:ybhJ
Ordered Locus Names:b0771, JW5103
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13666. ybhJ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000768961 – 753Uncharacterized protein YbhJAdd BLAST753

Proteomic databases

PaxDbiP75764.
PRIDEiP75764.

Interactioni

Protein-protein interaction databases

BioGridi4259968. 17 interactors.
DIPiDIP-11413N.
STRINGi511145.b0771.

Structurei

3D structure databases

ProteinModelPortaliP75764.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the aconitase/IPM isomerase family.Curated

Phylogenomic databases

eggNOGiENOG4107QM5. Bacteria.
COG1048. LUCA.
HOGENOMiHOG000118046.
InParanoidiP75764.
KOiK01681.
OMAiKPGNGQM.
PhylomeDBiP75764.

Family and domain databases

Gene3Di3.20.19.10. 1 hit.
3.30.499.10. 3 hits.
3.40.1060.10. 1 hit.
InterProiIPR015931. Acnase/IPM_dHydase_lsu_aba_1/3.
IPR015937. Acoase/IPM_deHydtase.
IPR001030. Acoase/IPM_deHydtase_lsu_aba.
IPR015928. Aconitase/3IPM_dehydase_swvl.
IPR015932. Aconitase/IPMdHydase_lsu_aba_2.
IPR000573. AconitaseA/IPMdHydase_ssu_swvl.
[Graphical view]
PANTHERiPTHR11670. PTHR11670. 3 hits.
PfamiPF00330. Aconitase. 1 hit.
PF00694. Aconitase_C. 1 hit.
[Graphical view]
PRINTSiPR00415. ACONITASE.
SUPFAMiSSF52016. SSF52016. 1 hit.
SSF53732. SSF53732. 1 hit.

Sequencei

Sequence statusi: Complete.

P75764-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKLSEKGVF LASNNEIIAE EHFTGEIKKE EAKKGTIAWS ILSSHNTSGN
60 70 80 90 100
MDKLKIKFDS LASHDITFVG IVQTAKASGM ERFPLPYVLT NCHNSLCAVG
110 120 130 140 150
GTINGDDHVF GLSAAQRYGG IFVPPHIAVI HQYMREMMAG GGKMILGSDS
160 170 180 190 200
HTRYGALGTM AVGEGGGELV KQLLNDTWDI DYPGVVAVHL TGKPAPYVGP
210 220 230 240 250
QDVALAIIGA VFKNGYVKNK VMEFVGPGVS ALSTDFRNSV DVMTTETTCL
260 270 280 290 300
SSVWQTDEEV HNWLALHGRG QDYCQLNPQP MAYYDGCISV DLSAIKPMIA
310 320 330 340 350
LPFHPSNVYE IDTLNQNLTD ILREIEIESE RVAHGKAKLS LLDKVENGRL
360 370 380 390 400
KVQQGIIAGC SGGNYENVIA AANALRGQSC GNDTFSLAVY PSSQPVFMDL
410 420 430 440 450
AKKGVVADLI GAGAIIRTAF CGPCFGAGDT PINNGLSIRH TTRNFPNREG
460 470 480 490 500
SKPANGQMSA VALMDARSIA ATAANGGYLT SASELDCWDN VPEYAFDVTP
510 520 530 540 550
YKNRVYQGFV KGATQQPLIY GPNIKDWPEL GALTDNIVLK VCSKILDEVT
560 570 580 590 600
TTDELIPSGE TSSYRSNPIG LAEFTLSRRD PGYVSRSKAT AELENQRLAG
610 620 630 640 650
NVSELTEVFA RIKQIAGQEH IDPLQTEIGS MVYAVKPGDG SAREQAASCQ
660 670 680 690 700
RVIGGLANIA EEYATKRYRS NVINWGMLPL QMAEVPTFEV GDYIYIPGIK
710 720 730 740 750
AALDNPGTTF KGYVIHEDAP VTEITLYMES LTAEEREIIK AGSLINFNKN

RQM
Length:753
Mass (Da):81,505
Last modified:December 15, 1998 - v2
Checksum:iA75D1AE0F7CDF588
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73858.2.
AP009048 Genomic DNA. Translation: BAA35435.2.
PIRiC64813.
RefSeqiNP_415292.2. NC_000913.3.
WP_000593938.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73858; AAC73858; b0771.
BAA35435; BAA35435; BAA35435.
GeneIDi945380.
KEGGiecj:JW5103.
eco:b0771.
PATRICi32116743. VBIEscCol129921_0797.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73858.2.
AP009048 Genomic DNA. Translation: BAA35435.2.
PIRiC64813.
RefSeqiNP_415292.2. NC_000913.3.
WP_000593938.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75764.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259968. 17 interactors.
DIPiDIP-11413N.
STRINGi511145.b0771.

Proteomic databases

PaxDbiP75764.
PRIDEiP75764.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73858; AAC73858; b0771.
BAA35435; BAA35435; BAA35435.
GeneIDi945380.
KEGGiecj:JW5103.
eco:b0771.
PATRICi32116743. VBIEscCol129921_0797.

Organism-specific databases

EchoBASEiEB3430.
EcoGeneiEG13666. ybhJ.

Phylogenomic databases

eggNOGiENOG4107QM5. Bacteria.
COG1048. LUCA.
HOGENOMiHOG000118046.
InParanoidiP75764.
KOiK01681.
OMAiKPGNGQM.
PhylomeDBiP75764.

Enzyme and pathway databases

BioCyciEcoCyc:G6401-MONOMER.
ECOL316407:JW5103-MONOMER.

Miscellaneous databases

PROiP75764.

Family and domain databases

Gene3Di3.20.19.10. 1 hit.
3.30.499.10. 3 hits.
3.40.1060.10. 1 hit.
InterProiIPR015931. Acnase/IPM_dHydase_lsu_aba_1/3.
IPR015937. Acoase/IPM_deHydtase.
IPR001030. Acoase/IPM_deHydtase_lsu_aba.
IPR015928. Aconitase/3IPM_dehydase_swvl.
IPR015932. Aconitase/IPMdHydase_lsu_aba_2.
IPR000573. AconitaseA/IPMdHydase_ssu_swvl.
[Graphical view]
PANTHERiPTHR11670. PTHR11670. 3 hits.
PfamiPF00330. Aconitase. 1 hit.
PF00694. Aconitase_C. 1 hit.
[Graphical view]
PRINTSiPR00415. ACONITASE.
SUPFAMiSSF52016. SSF52016. 1 hit.
SSF53732. SSF53732. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYBHJ_ECOLI
AccessioniPrimary (citable) accession number: P75764
Secondary accession number(s): Q9R7S5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: December 15, 1998
Last modified: November 2, 2016
This is version 116 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.