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Protein

Inner membrane protein YbhI

Gene

ybhI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciEcoCyc:B0770-MONOMER.
ECOL316407:JW0753-MONOMER.

Protein family/group databases

TCDBi2.A.47.3.5. the divalent anion:na(+) symporter (dass) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YbhI
Gene namesi
Name:ybhI
Ordered Locus Names:b0770, JW0753
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13665. ybhI.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 5CytoplasmicSequence analysis5
Transmembranei6 – 26HelicalSequence analysisAdd BLAST21
Topological domaini27PeriplasmicSequence analysis1
Transmembranei28 – 48HelicalSequence analysisAdd BLAST21
Topological domaini49 – 50CytoplasmicSequence analysis2
Transmembranei51 – 71HelicalSequence analysisAdd BLAST21
Topological domaini72 – 87PeriplasmicSequence analysisAdd BLAST16
Transmembranei88 – 108HelicalSequence analysisAdd BLAST21
Topological domaini109 – 148CytoplasmicSequence analysisAdd BLAST40
Transmembranei149 – 169HelicalSequence analysisAdd BLAST21
Topological domaini170 – 219PeriplasmicSequence analysisAdd BLAST50
Transmembranei220 – 240HelicalSequence analysisAdd BLAST21
Topological domaini241 – 272CytoplasmicSequence analysisAdd BLAST32
Transmembranei273 – 293HelicalSequence analysisAdd BLAST21
Topological domaini294 – 297PeriplasmicSequence analysis4
Transmembranei298 – 318HelicalSequence analysisAdd BLAST21
Topological domaini319 – 356CytoplasmicSequence analysisAdd BLAST38
Transmembranei357 – 377HelicalSequence analysisAdd BLAST21
Topological domaini378PeriplasmicSequence analysis1
Transmembranei379 – 399HelicalSequence analysisAdd BLAST21
Topological domaini400 – 445CytoplasmicSequence analysisAdd BLAST46
Transmembranei446 – 466HelicalSequence analysisAdd BLAST21
Topological domaini467 – 477PeriplasmicSequence analysisAdd BLAST11

GO - Cellular componenti

  • integral component of membrane Source: GO_Central
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001725231 – 477Inner membrane protein YbhIAdd BLAST477

Proteomic databases

PaxDbiP75763.
PRIDEiP75763.

Interactioni

Protein-protein interaction databases

BioGridi4261842. 133 interactors.
STRINGi511145.b0770.

Structurei

3D structure databases

ProteinModelPortaliP75763.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4107QPK. Bacteria.
COG0471. LUCA.
HOGENOMiHOG000117912.
InParanoidiP75763.
KOiK03319.
OMAiTSAMFVT.
PhylomeDBiP75763.

Family and domain databases

InterProiIPR030676. CitT-rel.
IPR001898. Na/sul_symport.
[Graphical view]
PfamiPF00939. Na_sulph_symp. 1 hit.
[Graphical view]
PIRSFiPIRSF002457. DASS. 1 hit.
TIGRFAMsiTIGR00785. dass. 1 hit.

Sequencei

Sequence statusi: Complete.

P75763-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKKSLWKLI LILAIPCIIG FMPAPAGLSE LAWVLFGIYL AAIVGLVIKP
60 70 80 90 100
FPEPVVLLIA VAASMVVVGN LSDGAFKTTA VLSGYSSGTT WLVFSAFTLS
110 120 130 140 150
AAFVTTGLGK RIAYLLIGKI GNTTLGLGYV TVFLDLVLAP ATPSNTARAG
160 170 180 190 200
GIVLPIINSV AVALGSEPEK SPRRVGHYLM MSIYMVTKTT SYMFFTAMAG
210 220 230 240 250
NILALKMIND ILHLQISWGG WALAAGLPGI IMLLVTPLVI YTMYPPEIKK
260 270 280 290 300
VDNKTIAKAG LAELGPMKIR EKMLLGVFVL ALLGWIFSKS LGVDESTVAI
310 320 330 340 350
VVMATMLLLG IVTWEDVVKN KGGWNTLIWY GGIIGLSSLL SKVKFFEWLA
360 370 380 390 400
EVFKNNLAFD GHGNVAFFVI IFLSIIVRYF FASGSAYIVA MLPVFAMLAN
410 420 430 440 450
VSGAPLMLTA LALLFSNSYG GMVTHYGGAA GPVIFGVGYN DIKSWWLVGA
460 470
VLTILTFLVH ITLGVWWWNM LIGWNML
Length:477
Mass (Da):51,351
Last modified:February 1, 1997 - v1
Checksum:i15F01F259DFEBE36
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73857.1.
AP009048 Genomic DNA. Translation: BAA35434.1.
PIRiB64813.
RefSeqiNP_415291.1. NC_000913.3.
WP_001036475.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73857; AAC73857; b0770.
BAA35434; BAA35434; BAA35434.
GeneIDi945377.
KEGGiecj:JW0753.
eco:b0770.
PATRICi32116741. VBIEscCol129921_0796.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73857.1.
AP009048 Genomic DNA. Translation: BAA35434.1.
PIRiB64813.
RefSeqiNP_415291.1. NC_000913.3.
WP_001036475.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75763.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261842. 133 interactors.
STRINGi511145.b0770.

Protein family/group databases

TCDBi2.A.47.3.5. the divalent anion:na(+) symporter (dass) family.

Proteomic databases

PaxDbiP75763.
PRIDEiP75763.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73857; AAC73857; b0770.
BAA35434; BAA35434; BAA35434.
GeneIDi945377.
KEGGiecj:JW0753.
eco:b0770.
PATRICi32116741. VBIEscCol129921_0796.

Organism-specific databases

EchoBASEiEB3429.
EcoGeneiEG13665. ybhI.

Phylogenomic databases

eggNOGiENOG4107QPK. Bacteria.
COG0471. LUCA.
HOGENOMiHOG000117912.
InParanoidiP75763.
KOiK03319.
OMAiTSAMFVT.
PhylomeDBiP75763.

Enzyme and pathway databases

BioCyciEcoCyc:B0770-MONOMER.
ECOL316407:JW0753-MONOMER.

Miscellaneous databases

PROiP75763.

Family and domain databases

InterProiIPR030676. CitT-rel.
IPR001898. Na/sul_symport.
[Graphical view]
PfamiPF00939. Na_sulph_symp. 1 hit.
[Graphical view]
PIRSFiPIRSF002457. DASS. 1 hit.
TIGRFAMsiTIGR00785. dass. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYBHI_ECOLI
AccessioniPrimary (citable) accession number: P75763
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.