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Protein

Uncharacterized outer membrane usher protein YbgQ

Gene

ybgQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Could be involved in the export and assembly of the putative YbgD fimbrial subunit across the outer membrane.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Fimbrium biogenesis, Transport

Enzyme and pathway databases

BioCyciEcoCyc:G6387-MONOMER.
ECOL316407:JW5099-MONOMER.

Protein family/group databases

TCDBi1.B.11.2.2. the outer membrane fimbrial usher porin (fup) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized outer membrane usher protein YbgQ
Gene namesi
Name:ybgQ
Ordered Locus Names:b0718, JW5099
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13313. ybgQ.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell outer membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 815794Uncharacterized outer membrane usher protein YbgQPRO_0000009329Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi795 ↔ 814Sequence analysis

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiP75750.
PRIDEiP75750.

Interactioni

Protein-protein interaction databases

BioGridi4259939. 126 interactions.
DIPiDIP-11401N.
IntActiP75750. 1 interaction.
MINTiMINT-1307660.
STRINGi511145.b0718.

Structurei

3D structure databases

ProteinModelPortaliP75750.
SMRiP75750. Positions 48-814.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the fimbrial export usher family.Curated

Keywords - Domaini

Signal, Transmembrane, Transmembrane beta strand

Phylogenomic databases

eggNOGiENOG4106PG1. Bacteria.
COG3188. LUCA.
HOGENOMiHOG000260138.
InParanoidiP75750.
OMAiDERMLPW.
PhylomeDBiP75750.

Family and domain databases

InterProiIPR000015. Fimb_usher.
IPR018030. Fimbrial_membr_usher_CS.
IPR025949. PapC-like_C.
IPR025885. PapC_N.
[Graphical view]
PANTHERiPTHR30451. PTHR30451. 1 hit.
PfamiPF13953. PapC_C. 1 hit.
PF13954. PapC_N. 1 hit.
PF00577. Usher. 1 hit.
[Graphical view]
PROSITEiPS01151. FIMBRIAL_USHER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P75750-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIYRLSFVS CLVMAMPCAM AVEFNLNVLD KSMRDRIDIS LLKEKGVIAP
60 70 80 90 100
GEYFVSVAVN NNKISNGQKI NWQKKGDKTI PCINDSLVDK FGLKPDIRQS
110 120 130 140 150
LPQIDRCIDF SSRPEMLFNF DQANQQLNIS IPQAWLAWHS ENWAPPSTWK
160 170 180 190 200
EGVAGVLMDY NLFASSYRPQ DGSSSTNLNA YGTAGINAGA WRLRSDYQLN
210 220 230 240 250
KTDSEDNHDQ SGGISRTYLF RPLPQLGSKL TLGETDFSSN IFDGFSYTGA
260 270 280 290 300
ALASDDRMLP WELRGYAPQI SGIAQTNATV TISQSGRVIY QKKVPPGPFI
310 320 330 340 350
IDDLNQSVQG TLDVKVTEED GRVNNFQVSA ASTPFLTRQG QVRYKLAAGQ
360 370 380 390 400
PRPSMSHQTE NETFFSNEVS WGMLSNTSLY GGLLISDDDY HSAAMGIGQN
410 420 430 440 450
MLWLGALSFD VTWASSHFDT QQDERGLSYR FNYSKQVDAT NSTISLAAYR
460 470 480 490 500
FSDRHFHSYA NYLDHKYNDS DAQDEKQTIS LSVGQPITPL NLNLYANLLH
510 520 530 540 550
QTWWNADAST TANITAGFNV DIGDWRDISI STSFNTTHYE DKDRDNQIYL
560 570 580 590 600
SISLPFGNGG RVGYDMQNSS HSTIHRMSWN DTLDERNSWG MSAGLQSDRP
610 620 630 640 650
DNGAQVSGNY QHLSSAGEWD ISGTYAASDY SSVSSSWSGS FTATQYGAAF
660 670 680 690 700
HRRSSTNEPR LMVSTDGVAD IPVQGNLDYT NHFGIAVVPL ISSYQPSTVA
710 720 730 740 750
VNMNDLPDGV TVAENVIKET WIEGAIGYKS LASRSGKDVN VIIRNASGQF
760 770 780 790 800
PPLGADIRQD DSGISVGMVG EEGHAWLSGV AENQLFTVVW GEQSCIIHLP
810
ERLEDTTKRL ILPCH
Length:815
Mass (Da):90,128
Last modified:April 27, 2001 - v2
Checksum:i1C7E6D64D28EF014
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73812.2.
AP009048 Genomic DNA. Translation: BAA35382.2.
PIRiE64807.
RefSeqiNP_415246.2. NC_000913.3.
WP_001350492.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73812; AAC73812; b0718.
BAA35382; BAA35382; BAA35382.
GeneIDi946537.
KEGGiecj:JW5099.
eco:b0718.
PATRICi32116631. VBIEscCol129921_0748.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73812.2.
AP009048 Genomic DNA. Translation: BAA35382.2.
PIRiE64807.
RefSeqiNP_415246.2. NC_000913.3.
WP_001350492.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75750.
SMRiP75750. Positions 48-814.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259939. 126 interactions.
DIPiDIP-11401N.
IntActiP75750. 1 interaction.
MINTiMINT-1307660.
STRINGi511145.b0718.

Protein family/group databases

TCDBi1.B.11.2.2. the outer membrane fimbrial usher porin (fup) family.

Proteomic databases

PaxDbiP75750.
PRIDEiP75750.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73812; AAC73812; b0718.
BAA35382; BAA35382; BAA35382.
GeneIDi946537.
KEGGiecj:JW5099.
eco:b0718.
PATRICi32116631. VBIEscCol129921_0748.

Organism-specific databases

EchoBASEiEB3097.
EcoGeneiEG13313. ybgQ.

Phylogenomic databases

eggNOGiENOG4106PG1. Bacteria.
COG3188. LUCA.
HOGENOMiHOG000260138.
InParanoidiP75750.
OMAiDERMLPW.
PhylomeDBiP75750.

Enzyme and pathway databases

BioCyciEcoCyc:G6387-MONOMER.
ECOL316407:JW5099-MONOMER.

Miscellaneous databases

PROiP75750.

Family and domain databases

InterProiIPR000015. Fimb_usher.
IPR018030. Fimbrial_membr_usher_CS.
IPR025949. PapC-like_C.
IPR025885. PapC_N.
[Graphical view]
PANTHERiPTHR30451. PTHR30451. 1 hit.
PfamiPF13953. PapC_C. 1 hit.
PF13954. PapC_N. 1 hit.
PF00577. Usher. 1 hit.
[Graphical view]
PROSITEiPS01151. FIMBRIAL_USHER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYBGQ_ECOLI
AccessioniPrimary (citable) accession number: P75750
Secondary accession number(s): Q9R7S6, Q9R7S7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: April 27, 2001
Last modified: September 7, 2016
This is version 121 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.