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Protein

Uncharacterized protein YbgO

Gene

ybgO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May be involved in a fimbrial system chaperoned by YbgP and exported by YbgQ.

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6385-MONOMER.
ECOL316407:JW5098-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbgO
Gene namesi
Name:ybgO
Ordered Locus Names:b0716, JW5098
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13311. ybgO.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000001380724 – 353Uncharacterized protein YbgOAdd BLAST330

Proteomic databases

PaxDbiP75748.
PRIDEiP75748.

Interactioni

Protein-protein interaction databases

BioGridi4259934. 15 interactors.
STRINGi511145.b0716.

Structurei

3D structure databases

ProteinModelPortaliP75748.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YqiI.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108MY7. Bacteria.
ENOG4110VJC. LUCA.
HOGENOMiHOG000125082.
InParanoidiP75748.
OMAiSIYPENQ.

Family and domain databases

Gene3Di2.60.40.1090. 1 hit.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
[Graphical view]
PfamiPF00419. Fimbrial. 1 hit.
[Graphical view]
SUPFAMiSSF49401. SSF49401. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P75748-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAGKGLLLV ICLLFLPLKS AMALNCYFGT SGGAVEKSEA IQPFAVPGNA
60 70 80 90 100
KPGDKIWESD DIKIPVYCDN NTNGNFESEH VYAWVNPYPG VQDRYYQLGV
110 120 130 140 150
TYNGVDYDAS LGKSRIDTNQ CIDSKNIDIY TPEQIIAMGW QNKICSGDPA
160 170 180 190 200
NIHMSRTFLA RMRLYVKIRE MPPHDYQSTL SDYIVVQFDG AGSVNEDPTA
210 220 230 240 250
QNLKYHITGL ENIRVLDCSV NFSISPETQV IDFGKFNLLD IRRHTMSKTF
260 270 280 290 300
SIKTTKSQND QCTDGFKVSS SFYTEETLVE EDKALLIGNG LKLRLLDENA
310 320 330 340 350
SPYTFNKYAE YADFTSDMLV YEKTYTAELS SIPGTPIEAG PFDTVVLFKI

NYN
Length:353
Mass (Da):39,539
Last modified:July 15, 1998 - v2
Checksum:i18598FDF92E01072
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73810.2.
AP009048 Genomic DNA. Translation: BAA35380.2.
PIRiC64807.
RefSeqiNP_415244.4. NC_000913.3.
WP_001272410.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73810; AAC73810; b0716.
BAA35380; BAA35380; BAA35380.
GeneIDi947550.
KEGGiecj:JW5098.
eco:b0716.
PATRICi32116627. VBIEscCol129921_0746.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73810.2.
AP009048 Genomic DNA. Translation: BAA35380.2.
PIRiC64807.
RefSeqiNP_415244.4. NC_000913.3.
WP_001272410.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75748.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259934. 15 interactors.
STRINGi511145.b0716.

Proteomic databases

PaxDbiP75748.
PRIDEiP75748.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73810; AAC73810; b0716.
BAA35380; BAA35380; BAA35380.
GeneIDi947550.
KEGGiecj:JW5098.
eco:b0716.
PATRICi32116627. VBIEscCol129921_0746.

Organism-specific databases

EchoBASEiEB3095.
EcoGeneiEG13311. ybgO.

Phylogenomic databases

eggNOGiENOG4108MY7. Bacteria.
ENOG4110VJC. LUCA.
HOGENOMiHOG000125082.
InParanoidiP75748.
OMAiSIYPENQ.

Enzyme and pathway databases

BioCyciEcoCyc:G6385-MONOMER.
ECOL316407:JW5098-MONOMER.

Miscellaneous databases

PROiP75748.

Family and domain databases

Gene3Di2.60.40.1090. 1 hit.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
[Graphical view]
PfamiPF00419. Fimbrial. 1 hit.
[Graphical view]
SUPFAMiSSF49401. SSF49401. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYBGO_ECOLI
AccessioniPrimary (citable) accession number: P75748
Secondary accession number(s): Q9R7S8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: July 15, 1998
Last modified: November 2, 2016
This is version 106 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.