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P75747 (ABRB_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 89. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein AbrB
Alternative name(s):
AidB regulator
Gene names
Name:abrB
Synonyms:ybgN
Ordered Locus Names:b0715, JW5097
ORF Names:ECK0704
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length348 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Seems to be involved in the regulation of AidB. Ref.4

Subcellular location

Cell inner membrane; Multi-pass membrane protein Ref.5.

Sequence similarities

Belongs to the AbrB family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 348348Protein AbrB
PRO_0000064432

Regions

Transmembrane20 – 4021Helical; Potential
Transmembrane59 – 7921Helical; Potential
Transmembrane83 – 10321Helical; Potential
Transmembrane138 – 15821Helical; Potential
Transmembrane173 – 19321Helical; Potential
Transmembrane196 – 21621Helical; Potential
Transmembrane221 – 24121Helical; Potential
Transmembrane259 – 27921Helical; Potential
Transmembrane288 – 30821Helical; Potential
Transmembrane315 – 33521Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P75747 [UniParc].

Last modified December 1, 2000. Version 2.
Checksum: 9A667EA6321B0B8A

FASTA34836,884
        10         20         30         40         50         60 
MPVLQWGMLC VLSLLLSIGF LAVHLPAALL LGPMIAGIIF SMRGITLQLP RSAFLAAQAI 

        70         80         90        100        110        120 
LGCMIAQNLT GSILTTLAVN WPIVLAILLV TLLSSAIVGW LLVRYSSLPG NTGAWGSSPG 

       130        140        150        160        170        180 
GAAAMVAMAQ DYGADIRLVA FMQYLRVLFV AGAAVLVTRM MLGDNAEAVN QHIVWFPPVS 

       190        200        210        220        230        240 
INLLLTILLA VVAGTVGCLL RLPSGTMLIP MLAGAVLQSG QLITIELPEW LLAMAYMAIG 

       250        260        270        280        290        300 
WRIGLGFDKQ ILLRALRPLP QILLSIFALL AICAGMAWGL TRFMHIDFMT AYLATSPGGL 

       310        320        330        340 
DTVAVIAAGS NADMALIMAM QTLRLFSILL TGPAIARFIS TYAPKRSA

« Hide

References

« Hide 'large scale' references
[1]"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map."
Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K., Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S., Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K. expand/collapse author list , Mori H., Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G., Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M., Horiuchi T.
DNA Res. 3:137-155(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[4]"Induction of the Escherichia coli aidB gene under oxygen-limiting conditions requires a functional rpoS (katF) gene."
Volkert M.R., Hajec L.I., Matijasevic Z., Fang F.C., Prince R.
J. Bacteriol. 176:7638-7645(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: POSSIBLE FUNCTION.
[5]"Global topology analysis of the Escherichia coli inner membrane proteome."
Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.
Science 308:1321-1323(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION.
Strain: K12 / MG1655 / ATCC 47076.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U00096 Genomic DNA. Translation: AAC73809.2.
AP009048 Genomic DNA. Translation: BAA35379.2.
PIRB64807.
RefSeqNP_415243.4. NC_000913.2.
YP_488995.1. NC_007779.1.

3D structure databases

ProteinModelPortalP75747.
ModBaseSearch...

Protein-protein interaction databases

STRING511145.b0715.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC73809; AAC73809; b0715.
BAA35379; BAA35379; BAA35379.
GeneID12930929.
945321.
KEGGecj:Y75_p0695.
eco:b0715.
PATRIC32116625. VBIEscCol129921_0745.

Organism-specific databases

EchoBASEEB3094.
EcoGeneEG13310. abrB.

Phylogenomic databases

eggNOGCOG3180.
HOGENOMHOG000076013.
KOK07120.
OMAPLEGYLA.
ProtClustDBCLSK879732.

Enzyme and pathway databases

BioCycEcoCyc:G6384-MONOMER.
ECOL316407:JW5097-MONOMER.

Gene expression databases

GenevestigatorP75747.

Family and domain databases

InterProIPR017516. AbrB_dup.
IPR007820. Put_NH3_mOase/AbrB.
[Graphical view]
PfamPF05145. AmoA. 1 hit.
[Graphical view]
PIRSFPIRSF038991. Protein_AbrB. 1 hit.
TIGRFAMsTIGR03082. Gneg_AbrB_dup. 2 hits.
ProtoNetSearch...

Entry information

Entry nameABRB_ECOLI
AccessionPrimary (citable) accession number: P75747
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: December 1, 2000
Last modified: May 1, 2013
This is version 89 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene

SIMILARITY comments

Index of protein domains and families

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