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Protein

Uncharacterized membrane protein YahN

Gene

yahN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6193-MONOMER.
ECOL316407:JW0320-MONOMER.

Protein family/group databases

TCDBi2.A.76.1.3. the resistance to homoserine/threonine (rhtb) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized membrane protein YahN
Gene namesi
Name:yahN
Ordered Locus Names:b0328, JW0320
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13598. yahN.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei22 – 4221HelicalSequence analysisAdd
BLAST
Transmembranei59 – 7921HelicalSequence analysisAdd
BLAST
Transmembranei85 – 10521HelicalSequence analysisAdd
BLAST
Transmembranei164 – 18421HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 223223Uncharacterized membrane protein YahNPRO_0000094741Add
BLAST

Proteomic databases

PaxDbiP75693.

Interactioni

Protein-protein interaction databases

BioGridi4259805. 9 interactions.
IntActiP75693. 3 interactions.
STRINGi511145.b0328.

Structurei

3D structure databases

ProteinModelPortaliP75693.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the rht family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105E82. Bacteria.
COG1280. LUCA.
HOGENOMiHOG000122945.
InParanoidiP75693.
KOiK03329.
OMAiVIWRVFL.
OrthoDBiEOG63VC09.
PhylomeDBiP75693.

Family and domain databases

InterProiIPR004778. Homoserine/Threonine_efflux.
IPR001123. LysE-type.
[Graphical view]
PANTHERiPTHR30086. PTHR30086. 1 hit.
PfamiPF01810. LysE. 1 hit.
[Graphical view]
PIRSFiPIRSF006324. LeuE. 1 hit.
TIGRFAMsiTIGR00949. 2A76. 1 hit.

Sequencei

Sequence statusi: Complete.

P75693-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMQLVHLFMD EITMDPLHAV YLTVGLFVIT FFNPGANLFV VVQTSLASGR
60 70 80 90 100
RAGVLTGLGV ALGDAFYSGL GLFGLATLIT QCEEIFSLIR IVGGAYLLWF
110 120 130 140 150
AWCSMRRQST PQMSTLQQPI SAPWYVFFRR GLITDLSNPQ TVLFFISIFS
160 170 180 190 200
VTLNAETPTW ARLMAWAGIV LASIIWRVFL SQAFSLPAVR RAYGRMQRVA
210 220
SRVIGAIIGV FALRLIYEGV TQR
Length:223
Mass (Da):24,811
Last modified:February 1, 1997 - v1
Checksum:iE17F5ABC31EE3F26
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti213 – 22311LRLIYEGVTQR → YA in AAB18053 (Ref. 1) CuratedAdd
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73857 Genomic DNA. Translation: AAB18053.1.
U00096 Genomic DNA. Translation: AAC73431.1.
AP009048 Genomic DNA. Translation: BAE76111.1.
PIRiH64759.
RefSeqiNP_414862.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC73431; AAC73431; b0328.
BAE76111; BAE76111; BAE76111.
GeneIDi944968.
KEGGiecj:JW0320.
eco:b0328.
PATRICi32115785. VBIEscCol129921_0334.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73857 Genomic DNA. Translation: AAB18053.1.
U00096 Genomic DNA. Translation: AAC73431.1.
AP009048 Genomic DNA. Translation: BAE76111.1.
PIRiH64759.
RefSeqiNP_414862.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP75693.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259805. 9 interactions.
IntActiP75693. 3 interactions.
STRINGi511145.b0328.

Protein family/group databases

TCDBi2.A.76.1.3. the resistance to homoserine/threonine (rhtb) family.

Proteomic databases

PaxDbiP75693.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73431; AAC73431; b0328.
BAE76111; BAE76111; BAE76111.
GeneIDi944968.
KEGGiecj:JW0320.
eco:b0328.
PATRICi32115785. VBIEscCol129921_0334.

Organism-specific databases

EchoBASEiEB3367.
EcoGeneiEG13598. yahN.

Phylogenomic databases

eggNOGiENOG4105E82. Bacteria.
COG1280. LUCA.
HOGENOMiHOG000122945.
InParanoidiP75693.
KOiK03329.
OMAiVIWRVFL.
OrthoDBiEOG63VC09.
PhylomeDBiP75693.

Enzyme and pathway databases

BioCyciEcoCyc:G6193-MONOMER.
ECOL316407:JW0320-MONOMER.

Miscellaneous databases

PROiP75693.

Family and domain databases

InterProiIPR004778. Homoserine/Threonine_efflux.
IPR001123. LysE-type.
[Graphical view]
PANTHERiPTHR30086. PTHR30086. 1 hit.
PfamiPF01810. LysE. 1 hit.
[Graphical view]
PIRSFiPIRSF006324. LeuE. 1 hit.
TIGRFAMsiTIGR00949. 2A76. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequence of minutes 4-25 of Escherichia coli."
    Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYAHN_ECOLI
AccessioniPrimary (citable) accession number: P75693
Secondary accession number(s): P71307, Q2MC95
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: July 6, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.